Gemmatimonas phototrophica: GEMMAAP_12940
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Entry
GEMMAAP_12940 CDS
T04580
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gph03000
]
GEMMAAP_12940
Transcription factors [BR:
gph03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GEMMAAP_12940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AMW05468
UniProt:
A0A143BKB8
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All DBs
Position
3075925..3076839
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AA seq
304 aa
AA seq
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MTQLSLNTLNYQHLLYFWVVAREGSIAKATVVLHLTQPTISTQLKLLERSMGAALFERRG
RHLVLTDTGHLVFHYADEMFRTGRELTEALTRGDVRLPARLIVGISDSLPKLTTWRLLRP
ALDAVPGLHLTCRIDKTERLVADLAVHALDVVLADTPASSSIPMTLYNHLLGECGVTVFA
TEALSAKYRRRFPQSLDGAPFIMPTSNTAMRRSLDTWCVANNVRPSIVCEAEDVALLQVF
GQEGMGLFAAPSVVEAQIRRAYHVRVVGRLPEVKEQFYAISAERKLAHPAVVALKEAAQA
RLFG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctatcgctcaacacgctgaattaccagcacctgttgtacttctgggtggtg
gcgcgcgagggaagcattgccaaggccacagtggtattgcatctcacgcagcctaccatc
agtacgcagttgaagctgctggagcgctccatgggggcggcgctgttcgaacgtcgtggg
cgtcatctggtgctcaccgacacgggccacctggtctttcattatgccgatgagatgttt
cgcaccgggcgcgaactcacggaggcattgacgcgtggcgacgtgagactaccggcgcga
ctgatcgtgggcatctcggattcactgccgaagcttaccacgtggcgtctgcttcgccct
gcccttgatgcggtgccgggactacacctcacctgtcgcattgataaaaccgaacgattg
gtggccgatctcgcagtacatgcccttgatgttgtgctcgccgacacccccgcctcatcg
tccattcccatgacgctgtacaatcacctgcttggtgaatgtggcgtgaccgtgtttgcc
accgaagctttgagcgccaagtaccgacgccgcttcccgcagtcgctggacggcgcgccg
ttcatcatgccgacgtcaaacaccgccatgcgccgttcgctggacacctggtgtgtggcc
aacaatgtgcgccccagcattgtgtgtgaggccgaggacgtcgcgctcctgcaagtcttc
gggcaggaggggatgggtctctttgccgcgccaagcgtggtggaagcacaaatccggcgg
gcgtaccacgttcgtgtcgtgggtcgcctgccggaagtgaaagagcagttctacgcaatc
tcggcagaacgaaagctggcgcaccctgccgtggtcgctctcaaggaggccgcacaggcc
cggttgtttggctag
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