Gemmatimonas phototrophica: GEMMAAP_13060
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Entry
GEMMAAP_13060 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03030
DNA replication
gph03430
Mismatch repair
gph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEMMAAP_13060
03430 Mismatch repair
GEMMAAP_13060
03440 Homologous recombination
GEMMAAP_13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gph03032
]
GEMMAAP_13060
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_13060
Enzymes [BR:
gph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEMMAAP_13060
DNA replication proteins [BR:
gph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEMMAAP_13060
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEMMAAP_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMW05485
UniProt:
A0A143BLL8
LinkDB
All DBs
Position
3113038..3113949
Genome browser
AA seq
303 aa
AA seq
DB search
MEPSSQQDMEAMVRSLEATGNYRVLRRFEARPRYQSPSPSTVVRRGLIVDVESTGLDTTS
DRIIELGLVAFEFDSAGMVYGVDAKQEWFEDPGIPIPAEVVEITGITDDMVRGQRIDDAA
VLQEVARAHLIIAHNASFDRRMLERRFPAFADKHWGCSLYDVPWVRFGCRGAKLDYLLFQ
LCNAFHTGHRAGDDCLATLHVLATPRDGETSPLTLLLENARKTTARLNAIGTPIESKDLL
KARGYRWFAGDRSRAKTWYRDLPESELEAEQSWLRQHAYGGLASPPWRVDTFTAKDRYSE
RVG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctcttcgcagcaagacatggaggcgatggtccgttccctcgaagccacaggg
aactaccgcgtgttgcggcgcttcgaagcgcggccgcggtaccagtcgccgtcgccgtcc
acggtggtgcgccgcggactcattgtcgatgtggagagtacggggctcgacactaccagc
gatcgcatcatcgaactcgggctcgtggccttcgagttcgacagcgccggcatggtgtac
ggcgtggacgccaagcaggaatggttcgaagaccctggcatccccattccggccgaagtg
gtggagatcaccggcattaccgacgacatggtgcgcggacaacgcattgatgacgccgcc
gtgcttcaggaagtcgcccgtgcgcatctgatcattgcgcacaacgccagctttgaccgt
cgcatgctggaacggcgcttcccggcgtttgccgacaagcactgggggtgctcactgtac
gatgtgccgtgggtgcgcttcggctgccgaggcgccaagctggactacctgctctttcag
ctgtgcaacgccttccacacgggtcatcgggcgggcgacgattgcctggccaccctgcat
gtgctggccactccacgcgatggtgagacgtcaccactcactctgctgttggaaaacgcg
cgcaagacgacagcgcgcctgaatgccattgggacacccattgaaagcaaggacctgctc
aaggcgcgcgggtaccgctggtttgccggcgaccggtcccgcgccaaaacgtggtaccgg
gaccttccggaatcggagctggaggccgagcagagctggttacgtcagcacgcctacggg
ggcttggccagccccccgtggcgagtggacacgttcacggccaaggaccgctattccgag
cgagtcggatag
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