Gemmatimonas phototrophica: GEMMAAP_14410
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Entry
GEMMAAP_14410 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
gph
Gemmatimonas phototrophica
Pathway
gph02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GEMMAAP_14410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gph03021
]
GEMMAAP_14410
Transcription machinery [BR:
gph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GEMMAAP_14410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_10
DUF2774
HTH_24
HTH_11
AAA_33
GerE
HTH_23
PCI
HTH_5
PF0610-like_N
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AMW05671
UniProt:
A0A143BMH7
LinkDB
All DBs
Position
3424394..3424945
Genome browser
AA seq
183 aa
AA seq
DB search
MTDSDLLIRLRQGDHAAFETIFRQWYEPVVRSANRILHEPQVAEELAQDVFLELWRRREQ
LPEGSSVPGYLMQAARNRALNHLRHLQVQKKSQVFVEALSEPTEQADADAQANELDVAIR
EAIAELPPRTREVFLMSRERNLKYSEIAEQLGITVKAVEANMSRALRQLREKLSPFLRRT
DST
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgactccgacctgctgatacggctccgtcagggcgatcacgcagcatttgagacg
atcttccggcagtggtacgaaccggtggttcggtcggccaaccgcattctgcacgagccg
caggtggccgaggaactggcgcaggatgtgtttctcgaattgtggcgccgccgtgagcaa
ttgcccgaggggagcagtgtgccgggctacctcatgcaggcggcgcggaaccgtgcgctc
aatcatctgcgacacctgcaggtgcaaaaaaagtcgcaagtctttgtagaagcgctgagt
gaaccgaccgaacaggcggatgccgatgcgcaggccaatgaactcgacgtcgccattcgc
gaagcgattgccgaactgccgccgcgtacccgcgaagtgtttctcatgagccgcgagcgg
aatctcaagtacagcgagattgccgaacagctgggcatcacggtcaaagccgtggaagcc
aatatgagccgggcattgcgacagttacgtgagaaattgtcgccgttcttgcgccgcacc
gacagcacatag
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