Gemmatimonas phototrophica: GEMMAAP_15305
Help
Entry
GEMMAAP_15305 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gph03016
]
GEMMAAP_15305
Enzymes [BR:
gph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GEMMAAP_15305
Transfer RNA biogenesis [BR:
gph03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GEMMAAP_15305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMW05791
UniProt:
A0A143BMV4
LinkDB
All DBs
Position
complement(3644773..3645942)
Genome browser
AA seq
389 aa
AA seq
DB search
MSLPPAPLYLDTADAVDRFLSGLTGVRTLALDTEGASFHRFVDRIYLLQLSTEHHEAVID
PLPIGTPLQLGALLEDRNVEVVLHDADYDLRLLHQDYGWRVTHLFDTRVAAQLLGIKAFG
LAALLEQFFGLKLDKKHQRADWSMRPLTADMLDYAAQDTRHLLGLRDRLHRELEKKGRWH
WAKEEFTRAEGTKWDTDGADQAFLRLKGARDLTRRELARLRELVKWRDTIAAELDRATFR
VAGNEVLLDLARLAPTTRDALFNVKGFPRGMNDARATDALQAVVRGNAVPDSELPRFPKS
ARWDKEPDFDDRVGRLKNVRDVAAARLDLDPGVLCSRDRMEAVARRKPRHVDDLESIPEL
RKWQIEVLGEEFVKALASFPADDSPYKPG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcctcccgcaccactctatctcgacacggccgacgccgttgatcgctttctc
tccggtctcaccggcgtgcgcacgctcgcgctcgatacggaaggcgcgagcttccatcgc
tttgtcgatcggatttatctgctgcaactttccacggaacatcacgaagcggtgatcgat
ccgttgcccattggcacgccactgcagctcggcgccctgctggaagatcgcaacgtggaa
gtggtgctgcatgacgcggattacgatctgcggttgttgcatcaggattacggatggcgg
gtcacgcatctgttcgacacgcgtgtggcggcgcagttgctggggatcaaggcgtttggg
ttggccgcacttctggaacagttcttcggactcaagctcgacaagaaacaccagcgcgcc
gactggagcatgcgaccgctcacggccgacatgctggactatgccgcgcaagacacacgc
cacttgttggggctgcgtgatcgtttgcaccgcgagctcgaaaagaaagggcgttggcac
tgggcaaaggaagagttcactcgcgccgaaggcacgaagtgggacaccgatggtgccgac
caggccttccttcgactcaaaggcgcgcgcgatctcacgcgacgtgaactcgcgcgcttg
cgtgaactggtgaagtggcgtgataccattgccgctgaactcgatcgcgccaccttccgc
gtcgccggcaatgaagtcctgctcgatcttgcacgtctggcgcccaccacgcgcgatgct
cttttcaacgtcaagggattcccgcgcggcatgaacgacgcgcgcgccactgacgcgctg
caggcggtcgttcgtggcaacgccgtgcccgattccgagttgccccgctttcccaaaagc
gctcgctgggataaggaacccgatttcgatgatcgcgtggggcgcctcaaaaacgtgcgc
gacgtggccgccgctcggcttgatctcgaccccggagtgctctgctcccgtgatcgcatg
gaagcggtggcgcgccgcaagccccgccatgtggatgacctggaaagcatcccggaactc
cgcaaatggcaaatcgaagtgctgggtgaggagttcgtcaaagcactggccagcttcccg
gccgacgattcgccctacaagccgggctga
DBGET
integrated database retrieval system
