KEGG   Gemmatimonas phototrophica: GEMMAAP_17365
Entry
GEMMAAP_17365     CDS       T04580                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gph  Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:gph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gph03400]
    GEMMAAP_17365
Enzymes [BR:gph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GEMMAAP_17365
    5.6.2.6  RNA 3'-5' helicase
     GEMMAAP_17365
DNA repair and recombination proteins [BR:gph03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GEMMAAP_17365
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AMW06078
UniProt: A0A143BM33
LinkDB
Position
4143387..4145924
AA seq 845 aa
MHDRVEAWFGARGWRPFDFQREVWRAYASGESGLIHAATGTGKTYAAWMGPLIESLNDTP
VVRKARRRADALPLRVLWITPLRALAADTEQALRLPVDELGLPWTVESRTGDTSQARRAR
QRERLPTALVTTPESLSLLLCRKDSAALFADLRCVVVDEWHELLSTKRGAQVELALARLR
QLRPTLRTWGVSATLGNLDVAAQTLLGYTNTGAPRTPRLVRGIVPKDIEVEALVPETMDR
FPWAGHLNTKLLPEVMQRLAQAESAIVFTNTRSQCEIWFQSIIAANPSWFEFTAIHHGSL
SRAQREDVEDGLKSGRYRVVVATSSLDLGVDFTPVDLVMQVGSPKGVARLLQRAGRSGHS
PGRVSRIVCVPTHAFELVEVAAARDAMRAGAIESRDPVDRPLDLLAQHLVTLALGGGFTR
AGVLAELRTTRAYRDLTGDELDWVIDFVTRGGEALRAYPEYAKVVCVDGVYIVTDRRVAL
RHVLNIGTIVSDAAIAVRYLKGGRLGTVEESFVSRLSPGDRFIFAGTPLEFVRLRDLTAW
VRKAKGMSGAVPRWQGARMPLSTELAAAVRDKLEEARRGEYLSPEMRSVKPVLLMQAERS
VIPRPDELLIERTETRDGHHLFVYPFEGRLVHEGLAALCAYRMAQLQPFSFSFSCNDYGL
ELLSPERAPLEEALEAGLFSITHLLHDVTHSLNAAELARRQFREIARVAGLIFSGYPGQS
KSVKQLQASSGLLYDVFVNYDPENLLVAQARREVLERQLEASRLGRVLDRLSRATIRVVD
VERPTPLAFPLMVDMTRAKLSTEKLADRVKRMTVAAEKPTKSGVMSVFRIDETVTKLMGP
SGGER
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgcatgatcgggtggaggcgtggttcggtgcgcggggctggcgtccgttcgattttcag
cgggaggtgtggcgtgcgtatgcgagcggcgaatcgggactcattcacgcggccaccggc
acgggaaaaacatacgccgcctggatggggccactcattgagtcgctgaacgacacgccg
gtcgtccggaaggcgcgacgtcgggccgatgcgctgccgctgcgcgtcctctggattacg
ccattgcgcgcgttggccgccgatactgaacaggcgctccgactgcccgtggacgagctg
gggctcccgtggaccgtggaatcgcgcaccggcgatacctcgcaggcgcgtcgcgcgcgc
caacgggagcgcctgccgacggcactggtgaccactccggaatcgctgtcgctgctattg
tgccgcaaggactcggcggcgctgttcgccgacctgcgctgtgtggtcgtggatgaatgg
cacgaactgctgtccaccaaacgtggcgcgcaggtggagctcgccttggcgcgattgcgg
cagctgcgcccgacactgcgcacgtggggggtatctgccacgctgggcaatcttgatgtg
gcggcgcagacccttctgggctacaccaacaccggtgcaccgcgcacgcctcggctcgta
cgaggcattgtacccaaggacatcgaggtggaggcactggtccccgagaccatggatcgc
tttccgtgggccgggcacctgaataccaagctgctccccgaagtcatgcagcggcttgca
caggcggagagcgccatcgtgttcacgaacacgcgctcgcagtgcgagatctggtttcag
agcatcattgccgccaacccgtcgtggtttgagttcacggccattcatcatggctcacta
tcgcgcgcgcagcgcgaagatgtggaagacggcctcaaatccgggcgatatcgcgtggtg
gtggccaccagttccctcgatctgggcgtggacttcacgccggtggacctggtgatgcag
gtgggaagccccaagggggtggcgcgtctgctgcagcgggctggacgctccggacactcg
ccggggcgcgtgtcgcgcattgtgtgtgtacccacccacgccttcgaactggtggaggtg
gccgcagcgcgcgatgccatgcgtgccggcgccattgaaagccgcgacccggtggaccgc
ccactggatctgctcgcgcaacacctggtgacgctggcgttaggtggagggttcacgcga
gcaggggtgctggcggagctgcgcaccacgcgcgcctatcgtgatctcaccggggacgag
ctggactgggtcatcgatttcgtcacgcggggtggtgaagcgctgcgggcgtaccccgaa
tatgccaaagtggtctgtgttgatggcgtgtacatcgtgaccgatcgccgagtggcgctg
cggcatgtgctcaacattggcaccatcgtgagtgatgccgccattgccgtacggtatctc
aagggtgggcgacttggcacagtcgaagagtcgttcgtgtcgcggctgtcacccggcgac
aggttcatctttgccggtacgcccctcgagtttgtacggttgcgtgatctcaccgcctgg
gtgcgcaaggccaaagggatgagcggggccgttccgcgctggcagggggcgcgcatgccg
ctctccacggaactcgcggccgccgtgcgcgacaaactcgaagaggcacgacgcggcgag
tatctgtcgccggaaatgcggtccgtgaagccggtgctgctcatgcaggcggagcgcagt
gtcattccgcgcccggatgaactgctcattgagcgcaccgaaacgcgtgatggtcatcat
ctgtttgtgtatccctttgagggacggctggtacacgaagggctggcggcgttgtgtgcg
taccgcatggcgcagctgcagcccttctccttctccttcagctgcaacgactacgggctt
gagctgttgagccccgagcgggcaccgctggaagaggcgttggaggcggggctcttcagt
atcacccatctactgcacgatgtcacgcatagtctcaacgcggcagagttggcgcggcgc
cagtttcgcgagattgcccgcgtggcgggactcattttctccggctatcccggacaatcc
aaaagcgtaaagcagctgcaggcatcgagcggcctgttgtacgatgtctttgtgaactac
gacccggagaatctgctcgtggcgcaggcgcgccgcgaagtgctggagcgccaacttgag
gccagccgattggggcgggtgctggaccggctgtcgcgcgcgacgattcgcgtggtggat
gtagagcgccccacgccactcgcgttccccctcatggtggacatgacgcgggccaaactc
agcaccgaaaagctggcggaccgcgtgaagcgcatgaccgtagcggcggagaagccgacc
aagtcgggggtgatgtcggtgttccgcattgacgagaccgtgacgaagctcatgggtccg
agcggcggcgaacggtga

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