Geobacter pickeringii: GPICK_01360
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Entry
GPICK_01360 CDS
T03568
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gpi
Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpi03016
]
GPICK_01360
Enzymes [BR:
gpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GPICK_01360
Transfer RNA biogenesis [BR:
gpi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GPICK_01360
Prokaryotic type
GPICK_01360
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AJE02200
UniProt:
A0A0B5BCA5
LinkDB
All DBs
Position
complement(301811..302905)
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AA seq
364 aa
AA seq
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MKKRLPFRYLEPTFCAGLLDDPLLLVNVRPLGRAILFDCGQLHHLAKRVLKSLDAVFVSH
AHMDHFMGFDTLVRHIHVSPRTVELFGPPDLARKVEAKLAGYDWNLTEPYWCTFRVHEVH
PGRILSFTFPGSEGFPRHPAGERERHGAEIWRNDFLTVAAELCDHNAIPTLVFRIFERPG
FWIDGDKMAAAGLVAGEWLRELKQRFYRGELDGKEIAAPLRAATGEVAWRSFEGRGLFEA
IRRDQEQASIGYLTDIGANGGNLATVRRLLDRVTLLACECSFLAADVAKARNSHHLCTTD
VSLLARELRPAHLLPMHLSKSYNTKGHLLYEELALPPETRLIRLPEHLTPRPLLPAEFPR
LGGA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgcctccccttccgctatctggagccgaccttctgcgccggactcctggac
gacccgctcctcctggtgaacgtccgccccctgggacgggcgatcctcttcgactgcggc
cagctccaccacctggcgaaacgggtcctgaaatccctcgacgcggtcttcgtcagccac
gcccacatggaccacttcatggggttcgacaccctggtccgccacatccacgtctcgccc
cggacggtggagctcttcggcccgccggacctcgcccggaaggtggaggcaaagctcgcc
ggctacgactggaacctgaccgaaccgtactggtgcaccttccgggtccacgaggtccac
cccggtcgcatcctgagcttcacctttcccggctccgaagggtttccgcgccacccggcc
ggggaacgggagcggcacggcgccgagatctggcgcaacgatttcctcaccgtggcggcg
gagctctgcgatcacaacgccatccccaccctcgtcttccgtattttcgagcgccccggc
ttctggatcgacggagacaagatggcggcggcggggctggtggcgggagagtggctccgg
gagctgaagcagcggttctaccggggggaattggacgggaaggagatcgcggcgccgctc
cgcgcggcgacaggggaggtggcgtggcgctccttcgaggggcgcgggctcttcgaggcg
atccgccgggatcaggaacaggccagcattggctacctcaccgacatcggcgccaacggg
ggaaatctggccacggtgcgccgcctcctcgacagggtgacgctcctcgcctgcgaatgc
tccttcctggcggcggacgtggccaaggcgcggaactcccaccacctctgcacgacggac
gtctccctcctcgcccgggagctccggccggcacatctcctcccgatgcacctctccaag
agctacaacacgaagggccacctcctctacgaggagctggcccttccgccggaaacccgg
ctcatccgccttcccgaacacctcaccccccggccgctgctgccggcggagtttccccgg
ctcgggggagcatga
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