Geobacter pickeringii: GPICK_01480
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Entry
GPICK_01480 CDS
T03568
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi00300
Lysine biosynthesis
gpi00470
D-Amino acid metabolism
gpi01100
Metabolic pathways
gpi01110
Biosynthesis of secondary metabolites
gpi01120
Microbial metabolism in diverse environments
gpi01230
Biosynthesis of amino acids
Module
gpi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GPICK_01480
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GPICK_01480
Enzymes [BR:
gpi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GPICK_01480
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AtzH-like
Motif
Other DBs
NCBI-ProteinID:
AJE02222
UniProt:
A0A0B5B6P9
LinkDB
All DBs
Position
328993..330246
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AA seq
417 aa
AA seq
DB search
MNHFQYKGNELFAEDVSLKEIVARVGSPVYVYSHATLTRHFKAFDEAFAGAPHTICYSVK
ANSTQSVLKTFINLGGGVDIVSGGELYRALKAGADPKKVVYSGVGKKDDEIEYALNTGIL
MFNVESEQELTRISEIASRMGKTAGIAIRVNPDVDPGTHPYITTGLKNAKFGITIDRAME
EYVRAKSLPGIDVIGIDMHIGSQLTKVNPFVDSIEKLKVMIGKLRSQGIDLQYFDCGGGL
GIQYNAEEPPLPADYGKEIVAATKDLGMHLVFEPGRNLVGNAGILVAKTLYTKARDEKNF
IMIDAGMNDLARPALYDSYHGVQAVTRDQDGMIVADIVGPICESGDFLVKGREVPMFKQG
DLVAFLSAGAYGFAMSSSYNSRPRVAEVMVKGDKFEVVRERETVEDLIKGEKVASFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagtacaaggggaacgagctctttgccgaggacgtttcgctcaaggag
atcgtcgccagggtgggctcgccggtctacgtctattcccacgccaccctgacccggcac
ttcaaggcctttgacgaggcgttcgccggcgccccccacaccatctgttactcggtcaag
gccaactccacccagtcggtcctcaagaccttcatcaatctcggcggcggcgtcgacatc
gtctccggcggcgagctctaccgggccctcaaggcgggcgccgatccgaagaaggtggtc
tactccggcgtcggcaagaaggacgacgagatcgagtacgccctgaataccggcatcctc
atgttcaacgtggagtcggagcaggagctgacccgcatctccgagatcgcctcccgcatg
gggaagacggccggcatcgccatccgggtgaaccccgacgtggatcccggcacccacccc
tacatcaccaccggcctcaagaacgccaagttcggcatcaccatcgaccgggccatggaa
gagtacgtgcgggccaagagcctgccgggaatcgacgtcatcggcatcgacatgcacatc
ggctcccagctcaccaaggtgaaccccttcgtcgactccatcgagaagctgaaggtgatg
atcggcaagctccgcagccaggggatcgaccttcaatacttcgactgcggcggcggcctc
ggcatccagtacaacgccgaagagccccccctgccggccgactacggcaaggagatcgtt
gccgccaccaaggatctcgggatgcacctggtcttcgagccggggcgcaacctggtcggc
aatgccggcatcctggtggccaagaccctctacaccaaggcccgggacgaaaagaacttc
atcatgatcgacgccggcatgaacgatctggcccggccggccctctacgactcctaccac
ggggtccaggcggtcaccagggaccaggacggcatgatcgtcgccgacatcgtcggcccc
atctgcgagtccggggacttcctggtcaaggggcgcgaggtgccgatgttcaagcagggt
gacctggtggccttcctgtcggccggcgcctacggtttcgccatgagcagttcctacaac
agtcggccgcgggtggccgaggtgatggtaaagggggacaagttcgaagtggtccgcgag
cgcgagaccgtcgaagacctcatcaaaggcgagaaagtcgccagctttctgtaa
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