Geobacter pickeringii: GPICK_02175
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Entry
GPICK_02175 CDS
T03568
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gpi
Geobacter pickeringii
Pathway
gpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GPICK_02175 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpi03021
]
GPICK_02175 (rho)
03019 Messenger RNA biogenesis [BR:
gpi03019
]
GPICK_02175 (rho)
Transcription machinery [BR:
gpi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GPICK_02175 (rho)
Messenger RNA biogenesis [BR:
gpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GPICK_02175 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
AAA_25
NACHT
ATPase_2
AAA
S1CSD-TOTE-2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AJE02340
UniProt:
A0A0B5BCS8
LinkDB
All DBs
Position
481665..482912
Genome browser
AA seq
415 aa
AA seq
DB search
MNLQELKGKKINELTAIAKGLNIEGASSLRKQDMIFAILNAQTEKNGMIFGEGVLECLPD
GFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLHTGDTVSGQIRPPKEGERYFALLKVETVN
FEPPEVARDKILFDNLTPLYPDEKIRLETAPDNMPMRVMELVSPIGKGQRGLIVAPPRTG
KTMLIQNIANSIAENHPEVYLIVLLIDERPEEVTDMQRSVRGEVVSSTFDEPATRHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPPSGKILSGGVDSNALHKPKRFFGA
ARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMEVHLDRKLVEKRTFPAIDINKS
GTRKEELLIEKSSLNRIWILRKVLHPMNVVDSMEFLLDKLSEAKSNQDFLDSMSK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcaagaactgaaagggaagaaaatcaacgagcttacggccatcgccaagggg
ctcaacatcgagggtgcatcgagtctgcgcaagcaggacatgatctttgccatcctcaac
gcccagaccgagaagaacggcatgattttcggcgagggggttctggagtgtctcccggac
ggcttcggcttcctccgggcccccgactacaactatctgccagggcccgatgatatctac
gtctccccctcccagatccgccgtttcaacctccacaccggcgataccgtttccggccag
atccgcccgccgaaggagggggagcgttattttgcgctgctcaaggtggaaacggttaac
tttgaaccccctgaagtggcgcgggacaagattctcttcgacaacctgacccccctctat
cccgatgagaagatcaggcttgagaccgcccccgacaacatgccgatgcgggtcatggag
ctggtttcccccatcggcaaggggcagcggggactcatcgtggcgccgccgcgtaccggc
aagacgatgctgatccagaacatcgccaactccattgccgagaaccatcccgaggtctac
ctgatcgtgctcctcatcgatgagcggccggaagaggtgaccgacatgcagcggtcggtc
aggggagaggtggtttcctccacctttgacgaaccggccacccgccacgtccaggtggcc
gagatggtcatcgaaaaggcgaagcgtctcgtggagcacaagcgcgacgtcgtgatcctc
ctcgattccatcacccgtctcgcccgggcttacaacaccgtcatccccccctccggcaag
atcctctccggcggggtcgactccaatgcccttcacaagccgaagcggtttttcggtgcg
gcccgcaacatcgaggaagggggctccctcaccatcatcgccaccgccctgatcgatacc
gggagcaagatggacgaggtcatcttcgaggagttcaaggggaccggcaacatggaggtc
catcttgaccggaagctcgtggagaagcggaccttcccggccatcgacatcaacaagtcg
gggacccggaaagaggagctcctcatagaaaagagctccctcaaccggatctggatcctc
cgcaaggtgcttcaccccatgaacgtggtcgacagcatggagttcctcctggacaagctc
tcggaggcgaaatcgaaccaggatttcctcgactccatgagtaagtga
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