Geobacter pickeringii: GPICK_03450
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Entry
GPICK_03450 CDS
T03568
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GPICK_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpi03021
]
GPICK_03450
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_03450
Enzymes [BR:
gpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GPICK_03450
Transcription machinery [BR:
gpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GPICK_03450
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GPICK_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Ig_GpJ_C
Epsilon_antitox
Motif
Other DBs
NCBI-ProteinID:
AJE02556
UniProt:
A0A0B5BER7
LinkDB
All DBs
Position
756774..757796
Genome browser
AA seq
340 aa
AA seq
DB search
MYRNWRDLISPKKLQVESDSLSNTYGKFFAEPFERGFGTTLGNSLRRVLLSSLQGAAITS
VRIKGVLHEFSAIPGVTEDVTNIILNLKGVALKMHGIEPRTVRIILKGEGSVKAGDIITD
PNVEVLNPDHHIATCSKDANLEMDMVVKIGKGYVPADRNRDEKAPVGTIPIDAIFSPIKK
VNFTVSNARVGQMTDYDKLTLEVWTNGSVIPEDAVAYAAKILKEQLTIFINFDEESEPLL
EMAGEEDREKINENLYRTVDELELSVRSANCLKNAGIKLIGELVSRTEAEMLKTQNFGRK
SLNEIKDILAEMGLTLGMKLEDFPDPEVIRRLRGDRKDEE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaactggcgcgacctgatcagcccgaagaagcttcaggttgagagcgattcg
cttagcaatacatatggcaagttttttgctgaaccttttgagcgtgggtttggtacaacg
ctcggtaactcgctgagacgcgtgttgttatcttcgctccaaggtgccgctattacttct
gttcggatcaaaggggttttgcatgagttttctgcgatccctggcgtaacggaggatgtg
accaatataattctcaacctcaaaggggttgcgctcaagatgcacggcattgagccgcgt
accgtgcgcatcatcctcaaaggtgaggggtcggtcaaggccggtgatatcatcacggat
cccaatgttgaggttttgaacccagaccatcatatcgctacctgctccaaggatgcgaat
cttgagatggatatggtggtaaagatcggcaagggctacgtgcctgcggatcgcaaccgg
gatgaaaaggcgccagttgggacgattccgatcgatgcaattttctccccgattaaaaag
gtcaactttacggtatcgaacgcacgggttgggcagatgaccgactacgacaagctgacg
ctcgaggtatggaccaacggaagcgtcattccggaagatgccgttgcgtatgcagcaaag
attctcaaagagcaactcaccatctttatcaactttgatgaagaatcggagcctcttctt
gagatggctggtgaagaggatcgtgaaaaaatcaacgagaatctctaccgtacggttgac
gaacttgaactttctgtccgttcggccaattgcctcaagaatgctggcatcaagttgatc
ggtgagctcgtgtctcgcacggaggccgagatgctcaaaacacagaattttgggcgcaaa
tcgcttaatgagattaaggatattctggcagagatggggctgactcttggcatgaagcta
gaggattttcctgacccggaagtcatccgtagattgcgtggcgatcgtaaggacgaagaa
taa
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integrated database retrieval system
