Geobacter pickeringii: GPICK_05935
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Entry
GPICK_05935 CDS
T03568
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi00020
Citrate cycle (TCA cycle)
gpi00190
Oxidative phosphorylation
gpi00650
Butanoate metabolism
gpi00720
Other carbon fixation pathways
gpi01100
Metabolic pathways
gpi01110
Biosynthesis of secondary metabolites
gpi01120
Microbial metabolism in diverse environments
gpi01200
Carbon metabolism
Module
gpi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GPICK_05935 (sdhA)
00650 Butanoate metabolism
GPICK_05935 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GPICK_05935 (sdhA)
00720 Other carbon fixation pathways
GPICK_05935 (sdhA)
Enzymes [BR:
gpi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GPICK_05935 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AJE02964
UniProt:
A0A0B5BCZ8
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All DBs
Position
1313094..1315007
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AA seq
637 aa
AA seq
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MILDGKCPTGPIEKTWDKHRFDMKLVNPANKRKYKILVVGTGLAGGAAAASLGELGYNVE
AFCYQDSPRRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVS
NNIIDQCVAQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALARQVKA
GTVKMFPRTEMLDLIVVDGEAKGITVRDLVTGEVRSHVGDAVVLCTGGYVNVFYLSTNAM
GCSVTAAWKAHKKGAFFANPCYTQIHPTCIPQHGDKQSKLTLMSESLRNDGRCWVPKSKG
DKRAPGEIPEEERDYYLERKYPSFGNLAPRDIASRAAKEQCDDDRGVGPGGRGVYLDFAA
SIKRLSEDTIRERYGNLFEMYEKITDENAYKVPMRIYPAPHYSMGGLWVDYNCESNVPGL
FVLGEANFSVHGANRLGASALMQGLADGYFVIPYTIANYLAKTAPGKVKADNPECKKSVD
DVTNNMKKLMSINGKKTVSEFHRELGKLMWENVGMARSEASCKEAIRKIPEIREEFWKNV
KVTGSGAEFNQQLENANRVADFLEFAELMARDSLYRDESCGGHFRVEHQMPDGEAKRDDE
KFCHAAAWEFKGVNAEPELHIEPLKFENVHLAIRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgatactcgacggaaaatgtccgacaggaccaatagagaagacttgggacaagcaccgc
ttcgacatgaagctggttaaccccgccaacaagcgtaaatacaagatcctcgttgtcggc
accggtcttgccggtggcgccgccgccgcctccctcggcgagctcggctacaacgtagaa
gctttctgttatcaggacagcccgaggcgagcccactccatcgccgcccagggggggatc
aacgccgccaagaactacccgaatgacggcgacagcatctaccgcctcttctatgacacg
atcaaggggggcgacttccgcgcccgcgaggccgacgtctggcgtcttgcccaggtctcc
aacaacatcatcgaccagtgcgtggcccagggcgttccctttgcccgcgactatgccggc
tacctggacaaccgctccttcggcggcgcccaggtctcccgtaccttctacgcccggggg
cagacggggcagcagctcctcctcggcgcctattcggcccttgcccgccaggtcaaggcc
ggtaccgtcaagatgttcccccgcaccgaaatgctcgacctcatcgtcgttgacggcgag
gccaaggggatcacggtccgcgatctcgtaaccggagaagtcaggtcgcacgtgggtgat
gcggtggtgctctgcaccggcggttacgtcaacgtcttctacctctccaccaacgccatg
gggtgcagcgtcaccgcagcgtggaaggcccacaagaagggggcgttcttcgctaacccc
tgttacacccagattcacccgacctgcatcccgcagcatggggacaagcagtccaagctg
accctcatgtccgagtcgctccgcaacgacgggcgttgctgggttcccaagagcaagggc
gacaaacgggcaccgggcgagattcccgaggaagagcgcgactactacctcgagaggaag
tacccgagcttcggtaacctcgctccgcgggacatcgcttcccgggcagccaaagaacag
tgcgacgacgatcgtggcgtcggaccgggcggccgtggcgtctatctcgactttgccgct
tccatcaagcgcctgagcgaggacaccatccgcgagcggtatggcaacctcttcgagatg
tacgagaagatcaccgacgagaacgcctacaaggtgccgatgcggatctatccggctccc
cactattccatgggtggcctctgggttgactacaactgcgagagcaacgtcccgggcctc
ttcgtcctgggcgaggccaacttctcggttcacggcgcgaaccgcctcggcgcctcggct
ctcatgcagggtcttgccgacgggtacttcgtcatcccttacaccatcgccaactacctg
gcgaagaccgctccgggcaaggtgaaggccgacaaccccgagtgcaagaagtcggttgac
gatgtcaccaacaacatgaagaagctcatgtcgatcaacggcaagaagactgtcagcgaa
ttccaccgcgagctgggcaagctcatgtgggagaatgtcggcatggccagaagcgaagcg
agctgtaaggaagccatcaggaaaatcccggagatccgcgaggagttctggaagaacgtg
aaggttaccggttcgggtgccgaattcaaccagcagctggagaatgccaaccgcgtggcg
gacttcctggagtttgcggaactcatggcccgtgattccctctatcgcgacgagtcgtgc
ggcggccacttccgggttgagcaccagatgccggacggcgaggccaagcgtgacgacgag
aagttctgccacgccgcggcctgggagttcaaaggtgtcaatgcagagcctgagctgcac
atcgagccgttgaagttcgaaaacgtccatctggcgataaggagctacaaataa
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