Geobacter pickeringii: GPICK_06985
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Entry
GPICK_06985 CDS
T03568
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GPICK_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_06985
Enzymes [BR:
gpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GPICK_06985
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GPICK_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJE03142
UniProt:
A0A0B5B9A1
LinkDB
All DBs
Position
1553465..1556644
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AA seq
1059 aa
AA seq
DB search
MPLNVYTSNRMEELVARLGDVLGARPLADPFSSEVLVVQSRGMQRWLAMELATRFGVWAN
ARYPFPNAFVQELFTAAVPGAGDLSPFDPAVMTWRVMETLPGFLDQPAFASIGGYLAGGE
RELKRYQLAGKIADTFDQYTIFRPEMLAGWERGREDHWQALLWRALATEGGLHRQRLREE
LFARLARRDVATLGLPERIAVFGVSYLPKFHLEIFSRIAPFTEVNLFVLSPCREYWADIL
PERVLARLTPEERTARIEGNPLLASLGRLGREFSETIVELSATAGGEADLYRGGDDGTLL
AAIQDDILNLRGGEPHRPKTAIDGGDRSLRLHSCHSPMREVEVLHDTLLAYFEEMTDLEP
RQVLVMTPDIEAYAPYIAAVFDGCQDPKKRIPYTIADRSIGAGGGLAETFLAILDLPGRR
FPVTAVMEIFAAAPVHERFGVRDTELDLVRRWLEETRIRWGMDEEERRAAGFPPFRENSW
RAGLDRLLLGYAMPDEGGRLFDGILPFDAMEGEGPAILGRFLTFVERLHGLLADLERPRS
LMEWEGLCRRIPDDFFAAPEESGFEMATLQGILDEVRELQSASGFGGTVGLPVIRSWFQG
RLRREQPAVGFMSGGVTFCAMLPMRSIPFRVIAMLGMNDDSFPRQNRPPGFDLIAAERRP
GDRSLRDEDRYLFLEALLSARERLIISSIGQSVRDNSPVPPSVLVDELLDYLERRYTDGT
PGFPASLVTRHRLQPFSPAYFTGTEELFSYADEECRAVANRLRGSVPAPSFVAEPLPSPP
DELRTVTLGSLLAFFDNPSRAFVRTRLGITLDEAASPLDDREPFGLDSLAAYDLRRELLE
RALAGDDPAALLPVARAKGVLPPARQGEMAFHALAAEVTEFAGRVAGLRGAGEPLEPLAV
DLAIGPFRVTGLLDGIRSERLVRYRCARLSGRDQVRLWIEHLVLNAVAETGYPTASALAM
TDGSLSFVPVAESRACLETLLNFYWDGLRTPLRFFPRAAAAYSRKWEIGSARTTWGGEFN
PEGNNPYYRLCYGGEDPLDGEFERVARVIFEPLAHHRGE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
gtgccccttaatgtctatacgagcaaccggatggaggaactggtcgcacggcttggtgat
gttctcggcgcccggccccttgccgatcccttttcatccgaggttctggttgtccagagc
agggggatgcagcgctggctggcgatggagctggcaacgcggttcggcgtctgggccaat
gcccgctatcccttccccaacgcattcgtgcaggagctcttcacggcggcggttcccggc
gcgggcgacctctctcccttcgatccggcggtgatgacctggcgggtcatggagacgctg
cccggcttcctcgatcagccggccttcgcaagcatcggcggctatcttgcggggggggag
cgggagctgaagcggtaccagctggccggaaagatcgccgacaccttcgaccagtacacc
attttccgccccgagatgcttgccgggtgggagagggggcgcgaggaccactggcaggcg
ctgctctggcgggcactggcaacggagggggggctgcaccgtcagcggctgcgcgaggag
ctcttcgcccggcttgcccggcgcgatgtcgctacccttgggctgccggagcggatcgcc
gtcttcggcgtctcgtacctgccgaaatttcacctggaaatcttttcccgcatcgcaccc
tttaccgaggtgaacctctttgtgctgagcccctgccgggagtactgggccgatatcctt
cccgagcgggtgctcgcccggctcaccccggaagagcgtacggcgcggatcgaggggaat
ccgctccttgcctctctcggccggctcggccgggagttttcggagaccatcgtcgagctc
agcgctaccgccggcggcgaggccgacctctaccgcggcggggacgacgggaccctgctg
gcggcgatccaggacgacatcctcaacctccggggtggagagccgcaccgccccaagacg
gccatcgacgggggggaccgctccctccggctccattcctgccacagcccgatgcgcgag
gtcgaggtgctccacgacaccctgctcgcgtacttcgaggagatgacggatctggagccg
cggcaggtcctcgtgatgacgccggacatcgaggcatatgcgccgtatatcgcggcggtc
ttcgacggttgccaggacccgaagaaacggattccgtacaccatcgccgaccggagcatc
ggtgcgggcggggggctcgccgagacgttcctggcgatcctcgatctccccggcaggcgc
tttccggtcacggcggtcatggagatattcgccgccgctccggtgcacgaacggttcggc
gtccgcgacacggagctggacctcgttcgccggtggctcgaggagacccgcatccggtgg
gggatggatgaggaggagcggcgcgccgccgggtttccccccttccgggagaacagctgg
cgggcggggctcgaccggctcctcctcggctacgccatgcccgacgagggggggcgcctc
ttcgacggcattctccccttcgatgccatggaaggggaggggccggcgatcctcggcagg
tttctcaccttcgttgagcggctgcacgggctgctggccgatctcgagcggccccgttcg
ctgatggagtgggaagggctctgccggcggattcccgacgatttctttgcggcaccggag
gagtcgggcttcgagatggcgacgctccaggggatcctcgacgaggtgcgggagcttcag
agcgcgtccggattcggcggcacggtggggctgccggtgatccgctcctggttccagggc
cgcctccggcgcgagcagcccgcggtcggcttcatgtccggcggcgtcacgttctgcgcc
atgctcccgatgcggagcatcccgttccgggtgatcgccatgctcgggatgaacgacgat
tccttcccccggcagaaccgcccccccggcttcgacctgatcgccgccgagcgccgcccc
ggcgaccgctcgctgcgcgacgaggaccgctacctcttccttgaggcgctcctctctgcc
cgcgagcggctcatcatcagctccatcggccagagcgtgcgcgacaacagccccgttccg
ccgtcggtcctggtggatgagctcctcgactatctggagcgccggtacaccgacggcact
cccggtttcccggcatcgctcgtgacgcgtcaccgcctccagcccttcagcccggcatac
ttcaccgggacggaagagctgttcagctatgccgacgaggagtgccgggccgtggcgaac
cggctgcgggggagcgtgccggctccctccttcgtcgcggagccgctgccgtcccctccc
gacgagctgcgtaccgttaccctcgggagcctccttgcctttttcgacaacccgtcccgc
gccttcgtccgcacccgactggggattacccttgatgaagccgcttcccccctggatgac
cgggagcccttcggcctcgattccctcgccgcctatgatctgcggcgcgagctgctggag
cgggcgctggcgggcgatgatccggcggcactcctccccgtggcccgcgccaaaggggta
ttgccccctgcccgccagggagagatggcatttcatgccctggccgcggaggtgacggag
tttgccgggcgggtcgccggactgaggggggcgggggagccgctggagcccctcgccgtc
gatctggccatcggtccgttccgggtgacgggacttctggacggaatccggagcgagcgg
cttgtccgctaccgctgcgcccgcctttcggggcgcgaccaggtgcggctctggatcgag
catctggtgctgaacgccgttgccgagacggggtaccccaccgccagcgccctggccatg
accgacggctccctctccttcgtgccggtggcggagagccgcgcctgcctggagacgctg
ctgaacttctattgggacgggctccggacgccgctgcggttcttcccccgcgctgccgcc
gcctactccaggaagtgggaaatcgggagcgcccggaccacctggggaggggaattcaat
cccgaggggaacaatccctactaccggctctgctacgggggggaagatcccctcgacggg
gagttcgagcgggtcgcccgggtcatcttcgagcccctcgcgcaccaccggggagaatga
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