Geobacter pickeringii: GPICK_07875
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Entry
GPICK_07875 CDS
T03568
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gpi
Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpi03016
]
GPICK_07875
Enzymes [BR:
gpi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GPICK_07875
Transfer RNA biogenesis [BR:
gpi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GPICK_07875
Prokaryotic type
GPICK_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AJE03278
UniProt:
A0A0B5B968
LinkDB
All DBs
Position
1767501..1768418
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AA seq
305 aa
AA seq
DB search
MDGFIVLDKPVGITSHDVVSAVRRTLRQKKAGHTGTLDPFATGVLPVAIGEGTKAIPFLD
EGIKEYQATMVLGSVTDTQDCTGTVIRQSEWEDLAPERIVAAIQSFVGRQSQLPPMFSAV
KRNGVPLYKLARKGEEVERTARDIEIYSIAVELVELPLVTFTVSCSRGTYVRALASDIGE
ALGCGAHLTALRRTKSGPFVIDHALRLDEFRRIAEAGDIERHVTAPGEALDHLRMLCLAD
EGAERVRHGMAPRLSDFTAMLENVRVGEQLRLTYGGHLLAIAESRGALWSENSKNLRLIR
VFNEV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacggtttcattgtcctggataaacccgtcggtatcacctcccatgacgtggtctcg
gccgttcgccgcaccctacgccagaagaaggccggacatacggggaccctcgatcccttt
gctacgggagttctgccggtagccatcggagaaggcaccaaggccattccatttcttgat
gagggaatcaaggaatatcaagctacgatggtgctcggttcggtcaccgatacacaggac
tgtaccggcacggtaatccgtcagagcgagtgggaagatctcgcgccggagcggatcgtg
gcagccattcagtcgttcgtcggacgtcagagccagctcccccccatgttttctgcggtg
aagagaaacggcgtgccgctctacaagcttgcccgcaagggagaagaggtcgagcggacg
gcccgtgacatcgagatatattcgattgccgttgagctcgtcgaattgccgctggtaact
tttaccgtctcgtgttcgcgagggacgtatgtgagggcacttgccagcgacatcggcgag
gcgctgggctgtggtgcccacctcacggcacttcgccgaacaaagagcggtccgtttgtc
attgaccatgcgcttcgactcgacgaattcaggcggatcgctgaagcgggagatatcgag
cgacatgtcactgctcccggcgaggcactcgatcatctccggatgctatgcctggcggac
gagggggcagagcgggttcgacacggcatggccccgcggttgagtgattttacggcgatg
cttgaaaatgtgcgggtgggggaacagttacggcttacctacggaggtcacctgctagcc
atagcggaaagccgcggcgcgctgtggtctgaaaattcgaaaaacctcaggcttatcagg
gtttttaacgaggtttag
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