Geobacter pickeringii: GPICK_09710
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Entry
GPICK_09710 CDS
T03568
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03030
DNA replication
gpi03430
Mismatch repair
gpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GPICK_09710
03430 Mismatch repair
GPICK_09710
03440 Homologous recombination
GPICK_09710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpi03032
]
GPICK_09710
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_09710
Enzymes [BR:
gpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GPICK_09710
DNA replication proteins [BR:
gpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GPICK_09710
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GPICK_09710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJE03589
UniProt:
A0A0B5BEK2
LinkDB
All DBs
Position
complement(2165453..2165971)
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AA seq
172 aa
AA seq
DB search
MRKDAHRHVVIDVETTGLSPGYGDRVIEIGAVAVDNGEIVAEFGSLVRVPKNIPRHVSRI
HGITNDMLADQPLPDEVYPALRAFVGGSVLVAHNARFDLAFLRHEFGRLGYRFDNRSVCT
LALARRRLPQLPDHRLETVYRHLFGALPEGGRRHRALDDARLTARVWGELKW
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagatgctcatcgtcatgtcgtcattgatgtggaaaccaccgggctttcaccg
ggctatggcgaccgggtgatcgagatcggtgccgttgcggtggacaatggtgagattgtg
gccgagttcggcagcctcgttcgggtcccaaagaatatcccgcgtcatgtttcgcggatt
cacggcattaccaatgacatgcttgccgaccaacctctgccggatgaggtctacccggcc
ctgcgggcctttgtcggcggcagtgttctcgtagcccacaatgcgcggtttgatctggcg
tttctacgccatgagttcgggcgtctggggtatcggttcgacaatcgctcggtctgcacc
ctggcgttggctcggcgcaggcttccgcaactgccggaccaccggttggagacggtctat
cgtcatctattcggggcactgcccgagggaggcaggcggcaccgggcgcttgatgatgcg
cggttgacggcacgggtgtggggggagctgaaatggtag
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