Geobacter pickeringii: GPICK_10465
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Entry
GPICK_10465 CDS
T03568
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GPICK_10465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpi02000
]
GPICK_10465
Enzymes [BR:
gpi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GPICK_10465
Transporters [BR:
gpi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GPICK_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_30
Zeta_toxin
AAA
AAA_22
AAA_33
ABC_ATPase
AAA_21
AAA_25
SRP54
AAA_24
NB-ARC
AAA_29
RsgA_GTPase
DO-GTPase2
TsaE
DUF3584
Motif
Other DBs
NCBI-ProteinID:
AJE03717
UniProt:
A0A0B5BAX3
LinkDB
All DBs
Position
complement(2323837..2325555)
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AA seq
572 aa
AA seq
DB search
METFKRILQYSKPYWGRIVISMVASLCVGGTDAAIAWMVEPLLKKIFADKDMTIFIFLPV
AVMVVFIFRGVARFIQGYYISTAGQLAIQDIRNEVYRKHMELSLRYFTVNPAGVLMSRVM
SDVGQMQSGVANVVTGLLRDGVTAIGLLGVIFYRNWQLALITFIVLPLTALPAQKIGKRM
KNLAKQSLGQMGEITSILQETFTGVKVVKAFRLEQSSVEKFSRTNLGLYHFLRKSIKYES
LHTPIMEIITSLGVAGVIWFGGSQVMSGRMSASEFFSFLTAMVMLYGPVKKLLSSYNTVQ
QAVGAAERVFEVIDRKAEIEDPADPLEMGTARGDVELRNVSFRYDDEEVLRNVSLSATRG
EVVALVGPSGAGKTTVMSLIPRFYDVTGGAVLIDGSDVRRLRLDDLLRQIALVDQETILF
NDTIANNIRLGRSDAPMEDVIQAARAAFAHDFIMEMPDGYETSIGDRGVRLSGGQRQRLC
IARAILKNAPILLLDEATSALDTESEHMVQQALANLMKNRTTLVIAHRLSTVLHADRIVV
IDKGEMVEVGTNDELLVRGGLYRKLYDMQFSA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgttcaagcgaatactccagtacagtaaaccctattggggccggatcgtcatc
tccatggtggcatcgctctgcgtcggcgggaccgacgccgccatcgcctggatggtggag
ccgctgctcaagaagatctttgccgataaggatatgacgatattcatcttcctgccggtg
gcggtgatggtcgtcttcatctttcgcggtgtggcccgtttcattcaggggtactacatc
tccaccgccggtcagttggctatccaggacatccgcaacgaagtctaccgcaagcacatg
gagctctcgctgcgctatttcaccgtcaatccggccggcgttctcatgtcgcgggtcatg
agcgacgtggggcagatgcagtcgggggtggcgaatgtggtcacggggctcctgcgggac
ggggtgacggccattggactcctcggcgtcatcttctatcgcaactggcaactggccctc
ataacgtttatcgtccttcccctcacggctctgccggcacagaagatcggcaaacggatg
aagaacctggccaagcagtccctcggtcagatgggggagatcacgagcatcctccaggag
accttcaccggggtcaaggtggtcaaggccttccgcctcgaacagagctccgttgagaag
ttcagccggacgaacctcggcctctatcactttctccggaagagtatcaagtacgagtcg
ctccacacgccgatcatggagatcatcacgtccctcggggtagcgggggtgatctggttc
ggcggcagccaggtcatgagcggccggatgtccgcatccgaattcttctcctttctgacc
gccatggtgatgctctatgggccggtgaagaagttgctcagctcctacaacaccgtccag
caggccgtgggggcagcggagcgggtcttcgaggtgatcgaccgcaaggcggagatcgag
gacccggccgatcctctggagatggggacggcgcggggcgacgtggaactgcggaacgtt
tcgttccgctacgacgacgaagaggttctccgcaacgtatcgctctcggccacgaggggg
gaggtggtggcactggtgggcccctccggggcgggaaagacgaccgtcatgtcactcatc
ccgcgcttctacgatgtgaccggcggcgcggtcctcatcgacgggagcgacgtgcggcgg
ctgcgtctggatgacctcctgcgccagatcgccctggtggatcaggagacgatcctcttc
aacgataccatcgccaataacatccgcctcgggcgctccgatgcccccatggaggatgtg
atacaggctgcccgcgccgcctttgcccacgacttcatcatggagatgccggacgggtac
gagacctccatcggcgaccggggggtgcggctctccggcggccagcgtcagcgtctctgc
atcgcccgggctattctcaaaaatgcgccgatcctcctcctggacgaggccaccagcgcc
ctggataccgagagcgagcacatggtgcagcaggccctcgccaatctcatgaagaaccgg
accaccctcgtcattgcccaccggctctccaccgtgctccatgcggaccggatcgtggtc
atcgacaagggggagatggtggaggtggggaccaacgacgagctcctggtccgcggcggc
ctctaccgcaaactctacgacatgcagttctcggcgtag
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