Geobacter pickeringii: GPICK_11045
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Entry
GPICK_11045 CDS
T03568
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GPICK_11045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_11045
Enzymes [BR:
gpi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GPICK_11045
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GPICK_11045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJE03814
UniProt:
A0A0B5BF92
LinkDB
All DBs
Position
complement(2460604..2461368)
Genome browser
AA seq
254 aa
AA seq
DB search
MQADDGTRATLASLRRYLEELKESGVEGLPFAPEGAAQAFEAARPPISQPLPAESECAVS
APPQRREILDDIRSDLGDCQRCALGAGRTTLVFGVGNPDARLLFVGEAPGREEDLQGEPF
VGEAGQLLTKIIGAMGLAREEVYICNVLKCRPPGNRNPHAEEIEACSSFLLRQVKAIAPE
AIIALGTFAAQTLLNTKEPISRLRGTFHDYHGIPLMSTFHPAFLLRNPERKREVWDDMKL
VMGRLGIAINSRKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggatgacgggacacgggcgacgcttgcatcgctcaggcgttatctggaggag
ctgaaggagagcggggtggaggggcttccctttgcccccgaaggtgccgctcaggctttt
gaggctgcgcgccccccaatatcccagcctctgccggctgaatccgagtgtgcggtttcg
gcgccgccacagaggcgggagatcctcgacgacatccggagcgatctcggcgactgccag
cgctgtgccctcggtgccgggcgcacgacgctcgttttcggtgtcggcaacccggacgcg
cggcttctcttcgtgggggaggcacccggccgcgaggaagacctccagggagaaccgttc
gtcggcgaggcagggcagctcctgacgaagatcatcggggccatgggcctggcgcgggag
gaggtctacatctgcaacgtcctcaagtgccggccgccggggaaccgcaacccccacgcc
gaggagatcgaggcgtgcagttcgttcctgctccggcaggtgaaggctattgcgccggag
gcgatcattgccctcggcacctttgccgcccagacgctcctgaacaccaaggagccgata
tcgaggctgcgcggaacgttccacgattatcacggaatccctctcatgtcgaccttccat
cccgcgtttctcctgcgcaaccccgaacggaagcgcgaggtctgggatgacatgaagctg
gtcatggggcggttggggatcgcgataaattcccggaagaagtga
DBGET
integrated database retrieval system
