Geobacter pickeringii: GPICK_11235
Help
Entry
GPICK_11235 CDS
T03568
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GPICK_11235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpi03019
]
GPICK_11235
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_11235
Enzymes [BR:
gpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GPICK_11235
Messenger RNA biogenesis [BR:
gpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GPICK_11235
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GPICK_11235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AJE03850
UniProt:
A0A0B5BHA4
LinkDB
All DBs
Position
complement(2498545..2500347)
Genome browser
AA seq
600 aa
AA seq
DB search
MTAPRTPLDTLRTVFGYRSFRPFQEEIVTRLIDGGDAFVLMPTGGGKSLCYQIPALHRPG
VGIVVSPLISLMKDQVDALRENGVAAAAYNSTLGEREARQVLARLHAGELDLLYVAPERL
MTDAFLERLRELPIALFAIDEAHCVSQWGHDFRPEYVGLGRLRGLFPGVPLIALTATADV
QTRTDIIARLGLRDAEIYVTGFDRPNIRYSVVEKRKPFNQLMDFLAGRPTEAGIVYALSR
KRVEEVAEKLRGAGVEAAAYHAGLADGERSRVQEAFLRDDVRVVVATVAFGMGIDKPNVR
FVVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPLSRSLIESGGNPEQIRIELH
KLNAMVGIAEAGTCRRQALLGYFGERLAEGCGNCDLCLDPPETFDATEDARKALSCVYRV
GQRFGVGHVIDVLRGSRNERIRQLGHDRLSTYGIGAHLSAEAWGSVIRQLIHRGYLEQDM
ANYSVLKLTPAARPLLKGEESLILARPRVKVAAPKKEPKRRGGTVPLAEGDEGLFQELRA
LRKRLADEQQVPPYVIFSDATLVEMAALRPATPDELLRINGVGEQKLGRYGAAFLDAIRR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctccccgcacccccctcgacaccctgcgcaccgtcttcggctaccgctccttc
cgcccgttccaggaggagatcgtcacccggctcatcgacggcggcgacgccttcgtcctg
atgccgaccgggggcggcaagtctctctgctaccagattccggccctccatcgccccggg
gtcgggatcgtcgtttcgcccctcatctcgctcatgaaggaccaggtggacgcgctgcgg
gaaaacggcgtggcggctgccgcctacaactccaccctgggggagcgggaggcgcggcag
gtgctggcccggctccatgccggcgaactggacctcctctacgtggcgccggagcggctc
atgaccgacgcgttcctggagcggctgcgggagctccccatcgccctcttcgccatcgac
gaggcccactgcgtctcccagtgggggcacgacttccgccccgaatacgtggggctcggc
cgcctgcgggggctcttccccggggtgccgctcatcgccctcaccgccaccgccgacgtc
cagacccgcaccgacatcatcgcgcggctcgggctgcgcgacgcggagatctatgtcacc
ggcttcgaccgccccaacatcaggtattcggtcgtcgagaaacgcaagcccttcaaccag
ctcatggatttcctggcgggccgcccgacggaggccggcatcgtctatgccctctcccgc
aagcgggtggaggaggtggcggagaagctgcggggcgccggggttgaggcggccgcctac
cacgcggggctggccgacggcgagcggagccgggtgcaggaggcgttcctgcgggacgac
gtccgggtggtggtggccaccgtcgccttcggcatggggatcgacaagcccaacgtccgg
ttcgtggtgcattacgacctgcccaagaacatcgagagctactatcaggagaccggtcgg
gccggccgcgacgggcttccggcggaggcgctcctcctcttcggttacggcgacatcccg
ctctcccgctccctcatcgaatcaggggggaatccggagcagatccggatcgagctccac
aagctgaacgccatggtcggcatcgccgaggcggggacctgccgccgtcaggccctcctc
ggctacttcggcgagcggcttgccgaggggtgcggcaactgcgacctctgtctcgatccc
cccgagaccttcgacgccaccgaggatgcccgcaaggccctctcctgcgtttaccgggta
gggcagcgcttcggcgtcggccatgtgatcgatgtcctgcggggctccagaaacgagcgg
atccgtcagctggggcacgaccggctctccacctacggtatcggcgcccacctctccgcc
gaggcgtgggggagcgttatccgccaactgatccaccgggggtacctggagcaggacatg
gccaactactcggtgctgaagctcactccggcggcccggccgctgctgaagggggaggaa
agcctcatcctcgcccggccgcgggtgaaggtggcggcgccgaagaaggagccgaagcgc
cggggggggaccgtccccctggccgagggggacgaggggctcttccaggagctccgggca
ctccgcaagcggctggccgacgagcagcaggttcccccctacgtcatcttcagcgacgcc
accctagtggagatggcggcgctgcgcccggccacccccgacgaactcctccggatcaac
ggggtgggggagcagaagctcgggcgctacggcgccgcctttctcgacgccatccggcga
taa
DBGET
integrated database retrieval system
