Geobacter pickeringii: GPICK_11885
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Entry
GPICK_11885 CDS
T03568
Name
(GenBank) peptidoglycan-binding protein LysM
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
gpi
Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gpi01002
]
GPICK_11885
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpi01011
]
GPICK_11885
Peptidases and inhibitors [BR:
gpi01002
]
Cysteine peptidases
Family C40
GPICK_11885
Peptidoglycan biosynthesis and degradation proteins [BR:
gpi01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
GPICK_11885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
LysM
LysM3_LYK4_5
LysM_RLK
Peptidase_C92
LRAT
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AJE03960
UniProt:
A0A0B5BHK9
LinkDB
All DBs
Position
complement(2642424..2643461)
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AA seq
345 aa
AA seq
DB search
MNIRLRLAALTVFLLVFPSLSFAAKTHKVRKNETVTSIARKYHVSAGELKAANNLAKNRV
SPGTVLVIPPRTAADTSSDAPKTSASTYKVKKGDTLAKVARKTGVAEGELRRLNALRKNR
LKPGQFLVLKEADPTPAAEPAPKLSLKKPLRNGELFSEKEYEQSLAELMDGDPDRPADFT
KGVTLQVDGITELKKSAYSFIGTRYRFGGTTRRGLDCSSFVQHVFRELDVTLPRTAREQF
QMGNAVATGDLQKGDLLFFHTYARFASHVGIYLGNNKMIHASSRDRRVVISSIDTPYYRS
RFLGAKRIARVNPDTLRLDDLTAGVEEEGVEDILMNDTLGVSLLK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacgattgcggcttgccgcgctcaccgtcttcctgctcgtttttccttccctt
tcctttgccgccaagacccataaagttcgcaaaaacgagaccgttacctccatagcacgc
aagtatcacgtcagtgccggcgagctcaaggccgccaacaacctcgccaagaaccgcgtt
tctcccggtaccgtcctcgtcatccctccccgcacggcggctgatacttcctctgatgct
cccaagacttcggcaagcacctacaaggtcaaaaagggggatacccttgccaaggtggca
cgcaagaccggtgttgccgagggggaactgcggcggctcaacgcgctgcgcaaaaaccgc
ctgaagcctggacagttcctcgtactgaaggaggccgatccgactccggcggcggagccg
gcaccgaagctctccctgaagaagcccctcagaaatggtgagctcttcagcgagaaggaa
tacgagcagagcctcgcagaactgatggatggcgatccggaccgtcccgccgatttcacc
aagggggtaacgctccaggttgacggtatcacagagctgaaaaagagcgcctacagcttc
atcggcacccggtatcgcttcgggggaacgacccgtcgtggtctcgactgctccagcttt
gtccagcacgtgttccgggagctggacgtaaccctcccccgcaccgcccgcgagcagttc
cagatggggaacgcggtggccacgggcgacctgcagaagggcgatctgctcttttttcac
acctacgcgcgctttgcctcccacgtcggcatctatctcggcaacaacaagatgatccat
gcctcgtcccgcgaccggcgcgtcgtgatttcctccattgataccccttactaccgttca
cggttcctgggggccaagcggatcgccagggtcaatcccgacaccctcaggcttgatgac
ctgaccgccggggtcgaggaggaaggggttgaggatatcctgatgaacgacacccttggg
gtcagcctgctcaagtaa
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