Geobacter pickeringii: GPICK_12680
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Entry
GPICK_12680 CDS
T03568
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
gpi
Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpi03021
]
GPICK_12680
Transcription machinery [BR:
gpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GPICK_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
PgaD
HTH_20
GntR
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AJE04101
UniProt:
A0A0B5BJ62
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All DBs
Position
2815322..2816176
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AA seq
284 aa
AA seq
DB search
MTMALPVVADSLTLYLAEIRKFSVLTPEEEHLYAVKFYEEKDLEAAHRLITANLRFVVKI
AAEYKSYGMKMLDLVQEGNIGLMMAVRKFNPHKGIRLISYAVWWIRAYIQNYIISAWSLL
KIGTTQAQKKLFFKLGQAKDAIRRLTGSDDTEATALSLDVKESEVIEMDQRMRGDCSLDA
ELVNGEGMTLLETLADERQNQEEALAEHEETALLRGYVAQAVERLNEKERFVIERRVTAD
TPLTLQEIADHFSISRERVRQIEEGALKKIKAFLAPAISSATPA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggctctccccgttgttgccgacagtcttaccctctacctcgccgaaatcaga
aaattctcggtcctcacccccgaggaagagcacctctatgccgtgaagttctatgaggag
aaggaccttgaggccgcccaccgcctcatcaccgccaatctccgcttcgtagtgaagatc
gccgccgagtacaagtcctacggcatgaagatgctcgacctggtgcaggaaggaaacatc
ggcctgatgatggcggtgcgcaaattcaatccccacaaggggatccgcctgatttcctac
gcggtctggtggatccgggcctacatccagaactacatcatctccgcctggagcctcctc
aaaatcggcaccacccaggcgcagaagaagctctttttcaagcttggccaggccaaggac
gccatccgacgcctcaccggctccgacgacaccgaggcgaccgccctctctctggacgtg
aaagaatccgaagtgatcgagatggatcagcggatgcgcggcgactgctccctcgatgcg
gaactggtcaacggcgaagggatgacgctgctggaaaccctggcggacgagcggcagaac
caggaagaagcccttgccgagcatgaagaaaccgcgctgctgcggggatacgtggcacag
gcggtggagcggctcaatgaaaaggaacgcttcgtcatcgagaggcgggtcaccgccgac
acccccctcacccttcaggagatagcggaccatttctccatctcccgcgaacgggtccgc
cagatcgaagagggagccctcaagaaaatcaaggcgtttctcgccccggccatctcttcc
gcaacgccggcgtag
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