Geobacter pickeringii: GPICK_13710
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Entry
GPICK_13710 CDS
T03568
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi00300
Lysine biosynthesis
gpi00470
D-Amino acid metabolism
gpi01100
Metabolic pathways
gpi01110
Biosynthesis of secondary metabolites
gpi01120
Microbial metabolism in diverse environments
gpi01230
Biosynthesis of amino acids
Module
gpi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GPICK_13710
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GPICK_13710
Enzymes [BR:
gpi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GPICK_13710
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJE04264
UniProt:
A0A0B5BGG1
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All DBs
Position
3031483..3032331
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AA seq
282 aa
AA seq
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MKFTKMHGAGNDYVYVNCFEERVENPEQVAIAVSNRNFGIGSDGLILIMPSDKADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVSKKEITAETGAGILTLQLVPGTDGKIEKVRVN
MGIPRLKRAEIPMAGEPADGEIVSQPLNILHTTFQITCVSMGNPHCVIFVDDVENLQVEK
YGPLIENHELFPRRTNVEFVQIISRTEVRQRTWERGAGETLACGTGASAVCVAGALNGLT
DKKILNHLSGGDLELEWADDGFLYMTGPATEVFSGEIDLAKR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccaagatgcacggcgccggcaatgactatgtctacgtaaactgcttcgag
gagcgggttgaaaatcccgaacaggtggcgatcgcggtctccaaccgcaatttcggcatc
ggctccgacggcctcatcctcatcatgccctccgacaaggccgacgtccggatgcggatg
ttcaactccgacggctccgagtccgagatgtgcggcaacggcatccgctgcgtcgccaag
tatgcctatgaccacggcatcgtttccaagaaggagatcaccgccgagaccggcgccggc
atcctgaccctgcagctcgtccccggcaccgacgggaagatcgagaaggtgcgggtcaac
atgggcatcccccgcctgaagcgagccgagatccccatggccggcgaaccggccgacggg
gagatcgtcagccagcccctcaacatcctccacaccaccttccagatcacctgcgtctcc
atggggaacccccactgcgtgattttcgtggacgacgtagagaacctccaggtggagaag
tacggccccctcatcgagaatcacgagctcttcccccgccgcaccaacgtggaattcgtc
cagatcatctcccgcaccgaggtgcgccagcggacctgggagcggggcgccggcgagacc
ctggcctgcggcaccggcgccagcgccgtctgcgtggccggagccctcaacggcctcacc
gacaagaaaatcctcaaccacctctccggcggcgacctggagctggagtgggccgacgac
ggtttcctctacatgaccggcccggccaccgaggtcttctccggcgagatcgacctggcg
aaacggtaa
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