Geobacter pickeringii: GPICK_13720
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Entry
GPICK_13720 CDS
T03568
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GPICK_13720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_13720
Enzymes [BR:
gpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GPICK_13720
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GPICK_13720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AJE04266
UniProt:
A0A0B5BJK4
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All DBs
Position
3032865..3033719
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AA seq
284 aa
AA seq
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MNDYFGAHMSIAGGLHNAPGRGVKTGCGVIQIFTQNSNQWRGKIPSDSDVALFREQWEES
GLHEIVCHDIYLINLAAAPGEVREKSLAAFREEMERCARLGITKIVMHPGSHLGEGEETG
IKRICAAFDELFAAAPDFTGKVLLETTAGQGSNLGYTFEHLRAIIDGTAFSDRFGVCYDT
CHTFAAGYDITSREGYDRVFAEFDRIIGIDRLQCFHVNDSKKGLNCRIDRHEHIGQGAMG
LDGFRFLVNDPRFAKIPKVLETPKGDDDEFDIMNLKTLREMVGR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattatttcggcgcccacatgtccatcgccggcggcctccacaacgcccccggg
cgcggcgtgaagaccggctgcggcgtcatccagatcttcacccagaactccaaccagtgg
cgcggcaagatcccctccgactccgacgtcgccctcttccgggaacagtgggaagagtcg
gggctccacgagatcgtctgccacgatatctacctcatcaacctggccgccgccccgggc
gaggtccgggagaagagcctcgccgccttccgggaggagatggagcgctgcgcccgcctc
ggcatcaccaagatcgtcatgcaccccggctcccacctgggggagggggaagagaccggc
atcaagaggatctgcgcggccttcgacgagctcttcgccgccgcccccgacttcaccggg
aaggtgctcctggagaccaccgccggacaggggtccaacctcggctacaccttcgagcat
ctgcgcgccatcatcgacggcaccgccttctccgaccgcttcggcgtctgctacgacacc
tgccacacctttgccgccggctacgacatcaccagccgtgaggggtacgaccgggtcttc
gccgaattcgaccggatcatcggcatcgaccggctccagtgcttccacgtcaacgactcc
aagaaggggctcaactgccggatcgaccgccacgagcatatcggccagggggccatgggg
ctcgacggcttccggttcctggtgaacgacccgcgcttcgcaaagatccccaaggtcctg
gaaacccccaagggggacgacgacgaattcgacatcatgaacctcaagaccctgcgggag
atggtcggacgttga
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