Geobacter pickeringii: GPICK_14770
Help
Entry
GPICK_14770 CDS
T03568
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gpi
Geobacter pickeringii
Pathway
gpi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GPICK_14770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_14770
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GPICK_14770
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GPICK_14770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Kinesin
Phage_ORF5
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AJE04451
UniProt:
A0A0B5BK62
LinkDB
All DBs
Position
3243733..3245742
Genome browser
AA seq
669 aa
AA seq
DB search
MDRFTLVSDYAPRGDQPKAIAELGDGILRGDREQVLLGVTGSGKTFTMANVIASVNRPAL
ILAPNKTLAAQLYGEFKELFPHNAVEYFVSYYDYYQPEAYLPTTDTFIEKDSSINDEIDK
LRHAATRSLLTRRDVIIVASVSCIYGIGSPAEYQAMHVFFHQGEEYGRETLLRKLVEIQY
ERNDVDFHRGTFRVRGDIVEIFPAHEDEKALRIEFFGDTVEAIAEIDPLRGLVLQRLAKC
AIYPASHYVATRETLERAIEEIRTDLRERIQWFRGENMLVEAQRIEQRTMYDLEMMEEIG
FCQGIENYSRYFDGRAAGEPPYTLLDYFPRDYLLFADESHVTVPQVGGMYRGDRSRKETL
VNYGFRLPAALDNRPLTFREFTERLNQAVYVSATPADYELVQVGGVVVEQVIRPTGLLDP
VIQVRPASGQVDDLLHEIRETVARGERVLATTLTKRMAEDLTDYYRDLGVRVKYLHSDID
TIQRMQIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSARSLIQTCGR
AARNVNGRVVMYADTVTGSMQSCIGETARRRTLQETFNTEHGITPQTVKKGLRTILESIE
ERDYLTIPLAAEPREEYLPAEKIPKLVKKLRKEMLDAAKKLDFEKAAELRDRIKRLETRE
LGLKEDHHG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttcacccttgtcagtgactacgctccccgcggggaccaaccgaaggcgatc
gccgaactgggcgacggcatcctccgcggcgaccgcgagcaggtcctgctgggggtcacc
ggcagcggcaagacgttcaccatggccaacgtcatcgcctcggtgaaccgccccgccctc
attcttgcccccaacaagaccctggcggcccagctctacggcgagttcaaggagctcttc
ccccacaatgccgtggagtatttcgtctcctactacgactattaccagcccgaagcgtac
ctccccaccaccgacaccttcatcgagaaggactcctccatcaacgacgagatcgacaag
ctgcgccacgccgccacccgcagcctcctcacccggcgtgacgtgatcatcgtcgcctcg
gtctcctgcatctacggcatcggctcccccgccgagtaccaggcgatgcacgtcttcttt
caccagggggaggagtacggccgggagacgctcctgaggaaactggtggagatccagtac
gagcgtaacgacgtcgacttccaccgggggacctttcgcgtgcggggcgatatcgtggag
atcttcccggcccatgaggacgagaaggcgctgcggatcgagttctttggcgacacggtg
gaggccatcgccgagatcgaccccctgcgcggcctcgtgctccagcgcctcgccaagtgc
gccatctaccccgcctcccactacgtggcgacccgggagacgctggagcgggccatcgaa
gagatccggaccgacctgcgggagcggatccagtggttccggggagagaacatgctggtg
gaggcccagcggatagagcagcggaccatgtatgacctggagatgatggaggagatagga
ttctgccagggaatcgagaactactcccgctacttcgacggccgggcggcgggggagccc
ccctacaccctcctcgactacttcccccgcgattacctcctcttcgccgacgaatcccac
gtcaccgtcccccaggtgggggggatgtaccggggagaccgcagccgcaaggagaccctg
gtcaactacggcttccgccttccggcagccctcgacaaccgccccctcaccttccgggaa
ttcaccgagcggctcaaccaggcggtctacgtctcggccacccccgccgactacgaactg
gtccaggtggggggcgtggtggtggagcaggtgatccgccccaccggcctcctcgacccg
gtgatccaggtgcggccggcgagcggccaggtggacgatctcctccacgagatccgcgag
acggtggcccggggggagcgggtcctcgccacgaccctcaccaaacggatggcggaggat
ctcaccgactactaccgggacttgggtgtccgggtgaagtacctccactcggacatcgac
accatccagcggatgcagatcatccgggatctgcgcctcggtgagttcgacgtcctcgtc
gggatcaacctcctgcgggaagggctcgacatccccgaggtgtcgctggtggcgatcctc
gacgccgacaaggagggattcctccgctcggcccgctccctcatccagacctgcggccgg
gccgcgcgcaacgtcaacggccgcgtcgtcatgtacgccgacacggtgaccggctccatg
cagagctgcatcggcgagacggcccgccgccggacgcttcaggagacattcaacaccgag
cacggcatcaccccccagacggtgaagaaggggctgcgcaccatcctggaatcgatcgag
gagcgggactacctgacgattccccttgccgccgagccccgggaggagtacctcccggca
gagaagatcccgaagctcgtcaagaagctccgcaaggagatgctcgacgcggcgaaaaag
ctcgacttcgaaaaggccgcggagttgcgcgaccggatcaaacggctcgaaacgcgggaa
ctgggattgaaggaggaccaccatgggtga
DBGET
integrated database retrieval system
