KEGG   Geobacter pickeringii: GPICK_15060
Entry
GPICK_15060       CDS       T03568                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
gpi  Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpi03400]
    GPICK_15060
DNA repair and recombination proteins [BR:gpi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     GPICK_15060
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB DnaB_C AAA_16 Lon_C ChlI DUF7125 nSTAND3 NTPase_1 SLFN-g3_helicase AAA_22 Rad51 AAA_14 AAA NPHP3_N PAXNEB RecA DUF7129 NACHT MCM AAA_19 ABC_tran GvpD_P-loop AAA_24 Isochorismatase AAA_11 zf-RING_10
Other DBs
NCBI-ProteinID: AJE04504
UniProt: A0A0B5BH49
LinkDB
Position
3312362..3313714
AA seq 450 aa
MKTTTIYVCQGCGYHSPKWLGKCPDCGAWNSFTEEVRGREKGGRLAPAAGVKAVPLCEVA
GETEERLSCGISEFDRVLGGGLVAGSLVLIGGDPGIGKSTILLQVMNHLAESAGPALYVS
GEESARQTRLRAERLDIRAPKLLVLAETSLETILGQIAELSPRAVVIDSIQTMFTAGLES
APGSVSQVRECAGKLMVAAKRSGIPTFIVGHVTKDGALAGPRVLEHMVDTVLYFEGDQGH
AFRILRAVKNRFGSTNEIGVFEMKEGGLREVANPSALFLSERPVGVSGSAVVTTIEGSRP
LLVELQALVTPSSLGVPRRTTLGVDHNRLALLVAVLDKKVGLHLSGSDIFLNAAGGARLN
EPAADLGMVTALASSHLDKVIDPQTVIIGEVGLAGEVRAITQPETRVREAAKLGFTRAVI
PAGSLTQVSPLAGMEVIGVRSVEEALERLL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgaaaactacgactatttacgtctgccagggatgcggctaccactctcccaagtggctc
ggcaagtgccccgactgcggcgcctggaacagcttcaccgaagaggtgagggggcgggag
aaggggggacgtctcgcccctgccgccggagtgaaggcggtaccgctctgcgaggtggcg
ggggagactgaggagcggctctcctgcggcatctccgaattcgaccgggtcctcggcggc
gggctcgtggccggctccctggtgttgatcggcggcgatcccggcatcggcaagtcgacc
atcctcttgcaagtcatgaaccatctcgcggaaagcgcagggccggccctctacgtctcg
ggagaggagtcggcccgtcagacgcggctccgcgccgaacggctcgacatcagggcgccg
aaactccttgtactggccgaaacctcactggagaccatcctcggccagattgcggaactc
tccccccgggccgtggtcatcgactccatccagacgatgttcaccgccggcctcgaatcg
gcccccggcagcgtcagccaggtccgggagtgcgccggcaagctgatggtggcggcgaag
cggagcggaatccccaccttcatcgtcggtcacgtgaccaaggacggggcactggcgggg
ccgcgggtcctggagcacatggtcgacaccgtcctctacttcgagggggaccaggggcac
gccttccggatcctgcgggcggtgaagaaccgcttcggctccaccaacgagatcggcgtc
ttcgagatgaaggaaggggggctccgcgaggtggcgaatccctcggcccttttcctctcc
gagcgccccgtgggggtttccggctccgccgtcgtcaccaccatcgagggaagccgtcct
ctcctcgtggagttgcaggctctcgttaccccctcgtccctcggcgtgccgcggcgcacc
accctcggcgtcgaccacaaccgcctcgcgctcctggtggcggtactcgacaagaaggta
gggctccacctttccggcagcgacatcttcctcaacgccgccggcggcgcccggctgaac
gagccggcggctgacctcggcatggtgaccgccctggcgtcgagccatctcgacaaggtc
atcgacccgcagacggtcatcatcggcgaagtggggctcgccggtgaagtccgggccatc
acccagccggagaccagggtccgcgaggcggccaagctcggcttcacccgcgccgtcatc
cccgcagggagcctcacgcaggtgtcccccctcgccgggatggaagtgatcggggtgcgc
tcggtggaggaggcgctggaacggctcctctga

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