Geobacter pickeringii: GPICK_15060
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Entry
GPICK_15060 CDS
T03568
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gpi
Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpi03400
]
GPICK_15060
DNA repair and recombination proteins [BR:
gpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GPICK_15060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_16
Lon_C
ChlI
DUF7125
nSTAND3
NTPase_1
SLFN-g3_helicase
AAA_22
Rad51
AAA_14
AAA
NPHP3_N
PAXNEB
RecA
DUF7129
NACHT
MCM
AAA_19
ABC_tran
GvpD_P-loop
AAA_24
Isochorismatase
AAA_11
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AJE04504
UniProt:
A0A0B5BH49
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All DBs
Position
3312362..3313714
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AA seq
450 aa
AA seq
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MKTTTIYVCQGCGYHSPKWLGKCPDCGAWNSFTEEVRGREKGGRLAPAAGVKAVPLCEVA
GETEERLSCGISEFDRVLGGGLVAGSLVLIGGDPGIGKSTILLQVMNHLAESAGPALYVS
GEESARQTRLRAERLDIRAPKLLVLAETSLETILGQIAELSPRAVVIDSIQTMFTAGLES
APGSVSQVRECAGKLMVAAKRSGIPTFIVGHVTKDGALAGPRVLEHMVDTVLYFEGDQGH
AFRILRAVKNRFGSTNEIGVFEMKEGGLREVANPSALFLSERPVGVSGSAVVTTIEGSRP
LLVELQALVTPSSLGVPRRTTLGVDHNRLALLVAVLDKKVGLHLSGSDIFLNAAGGARLN
EPAADLGMVTALASSHLDKVIDPQTVIIGEVGLAGEVRAITQPETRVREAAKLGFTRAVI
PAGSLTQVSPLAGMEVIGVRSVEEALERLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactacgactatttacgtctgccagggatgcggctaccactctcccaagtggctc
ggcaagtgccccgactgcggcgcctggaacagcttcaccgaagaggtgagggggcgggag
aaggggggacgtctcgcccctgccgccggagtgaaggcggtaccgctctgcgaggtggcg
ggggagactgaggagcggctctcctgcggcatctccgaattcgaccgggtcctcggcggc
gggctcgtggccggctccctggtgttgatcggcggcgatcccggcatcggcaagtcgacc
atcctcttgcaagtcatgaaccatctcgcggaaagcgcagggccggccctctacgtctcg
ggagaggagtcggcccgtcagacgcggctccgcgccgaacggctcgacatcagggcgccg
aaactccttgtactggccgaaacctcactggagaccatcctcggccagattgcggaactc
tccccccgggccgtggtcatcgactccatccagacgatgttcaccgccggcctcgaatcg
gcccccggcagcgtcagccaggtccgggagtgcgccggcaagctgatggtggcggcgaag
cggagcggaatccccaccttcatcgtcggtcacgtgaccaaggacggggcactggcgggg
ccgcgggtcctggagcacatggtcgacaccgtcctctacttcgagggggaccaggggcac
gccttccggatcctgcgggcggtgaagaaccgcttcggctccaccaacgagatcggcgtc
ttcgagatgaaggaaggggggctccgcgaggtggcgaatccctcggcccttttcctctcc
gagcgccccgtgggggtttccggctccgccgtcgtcaccaccatcgagggaagccgtcct
ctcctcgtggagttgcaggctctcgttaccccctcgtccctcggcgtgccgcggcgcacc
accctcggcgtcgaccacaaccgcctcgcgctcctggtggcggtactcgacaagaaggta
gggctccacctttccggcagcgacatcttcctcaacgccgccggcggcgcccggctgaac
gagccggcggctgacctcggcatggtgaccgccctggcgtcgagccatctcgacaaggtc
atcgacccgcagacggtcatcatcggcgaagtggggctcgccggtgaagtccgggccatc
acccagccggagaccagggtccgcgaggcggccaagctcggcttcacccgcgccgtcatc
cccgcagggagcctcacgcaggtgtcccccctcgccgggatggaagtgatcggggtgcgc
tcggtggaggaggcgctggaacggctcctctga
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