Geomonas paludis: M1B72_00485
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Entry
M1B72_00485 CDS
T08160
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_00485 (radA)
DNA repair and recombination proteins [BR:
gpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M1B72_00485 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
RecA
AAA_16
GvpD_P-loop
AAA_24
SLFN-g3_helicase
Lon_C
nSTAND3
AAA_22
ABC_tran
AAA_14
DAP3
AAA
PAXNEB
Rad51
DUF7125
DUF4428
Zeta_toxin
AAA_29
AAA_19
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UPU36211
LinkDB
All DBs
Position
complement(121902..123263)
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AA seq
453 aa
AA seq
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MAKVKVKTGYVCSDCGANYPKWQGHCSACDAWSTIKEVRLGAEPRAGRRDGFAGATSAVT
LLGEVNCTEEARFSSGSEEFDRVLGGGFVPGSVILIGGDPGAGKSTILLQTMCHAAASKG
VLYVSGEESLQQIAGRARRLQLPLDRVKMLAESSVERVLEAADSVRPEVVVIDSIQVMQS
AGIDAAPGGVSQVRESAAAFTCYAKTSGVVLIMVGHVTKDQALAGPMTLSHMVDTQVMLS
STEDARYRLMRTTKNRFGPVNELGVFAMTERGLREVKNPSAIFLTRTETEAPGSLISVLW
EGTRPLLVEIQSLVVSAQYGSPRRLGIGLDQNRIAMILAVITKHGGLVLSDQDVFVNVVG
GIRVLETSADLAVALAIVSSFRNSVLPQDLLVFGEVGLSGEIRPVSNGESRLKEGVKHGF
TRAIVPKGNAPKKEIAGMKVVGVASLAEALDAI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtaaaggtgaagaccgggtacgtctgctccgactgtggcgcgaactatccc
aaatggcaggggcactgcagcgcctgcgacgcgtggagcaccatcaaggaggtgcgcctg
ggggccgagccccgtgccggccggcgcgacggtttcgccggagccacctcggcggtgacc
ctgctgggcgaggtgaactgcaccgaggaagcccgcttttccagcggcagcgaagagttc
gaccgggtcttggggggaggtttcgtccccggctccgtgatcctgatcggcggcgacccc
ggcgccggcaagagcaccatactgctgcagaccatgtgtcacgccgcggccagcaagggg
gtcctttacgtctcgggggaggaatccctgcagcagatcgcggggcgcgcccgcaggctg
cagctgccgctggaccgggtcaagatgctggccgagagctccgtggagcgggtcctggag
gcagccgacagcgtgcgccccgaggtggtggtcatcgactcgatccaggtgatgcaatcg
gctggaatcgacgcggccccggggggagtgtcccaggtgcgcgagtcggcagccgccttc
acctgctacgccaagacctccggggtggtcctgatcatggtcgggcacgtcaccaaggac
caggccctggccggccccatgaccctgtcgcacatggtcgacacccaggtgatgctctcc
tccaccgaggacgcccgctaccgcctcatgcgcaccaccaagaaccgcttcggcccggtg
aacgagctcggcgtcttcgccatgaccgagcgggggctgcgcgaggtgaagaatccttcc
gccatcttcctgacgcgcaccgagacggaggcgccggggagcctgatcagcgtgctctgg
gaggggaccaggccgctgctggtcgagatccagtcgctggtggtgtcggcccagtacggc
tcgccgcgccggctcggcataggcctcgaccagaaccgcatcgccatgatcctcgccgtg
atcaccaagcacggggggctggtgctctccgaccaggacgtctttgtcaacgtggtgggc
ggtatccgggtgctggagaccagcgccgacctggccgtcgcgctcgccatcgtctccagc
ttccgcaattcggtgcttccccaggacctgctggtattcggggaggtggggctgtccggg
gagatccgcccggtttccaacggcgagtcgcggctcaaggaaggggtgaagcacggtttc
acccgcgccatcgtccccaagggaaacgcacccaagaaggagatcgccggtatgaaggtg
gtcggggtcgcctccctcgccgaggccctcgacgccatctag
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