KEGG   Geomonas paludis: M1B72_01745
Entry
M1B72_01745       CDS       T08160                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
gpl  Geomonas paludis
Brite
KEGG Orthology (KO) [BR:gpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpl03400]
    M1B72_01745
Enzymes [BR:gpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     M1B72_01745
DNA repair and recombination proteins [BR:gpl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M1B72_01745
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII RadC Helicase_C DEAD_2 PhoH SecA_DEAD
Other DBs
NCBI-ProteinID: UPU36453
UniProt: A0ABY4LEN0
LinkDB
Position
complement(386555..389083)
AA seq 842 aa
MQKYFSALAIEQLRTAISEANGNEVFFLGRTDEARIVVTVEPLARGNKDAVPAIMIACSF
GDVVIHNHPSGNLNPSQPDIEIASLLGNQGVGFYIVNNDASRANQVVAPFARKVVERLSY
PEVEHFYAPDGVLAQALPGYEHRPEQSRMALNLSEAFNEEKVAIVEAGTGTGKSLAYLLP
AALWSVRNKERVVISTNTINLQEQLIQKDIPFLQQHAGVQFRAVLVKGRGNYLCLRKLRV
NAADASLFKDDTAQELDAIVAWSKKTEDGCRGDLAFIPKDEVWEELCCESDQCGRVKCPE
YPRCFFYKARREAAGADLLVVNHALLLADLSVRQETGYDATAILPPFHRLIFDEGHHLED
VATNFLSSQVSRLGLVKLLGKLQHPRKAHRGVLPQLSTQLSAAVPESQDDLYLEIAEVLE
GRLIPRRVAVLEAVTRGMDQIGEALFRKLKKDGVEQKLRVTPAIYNTPLWHEVTPHIENM
AKELSDYALAMQAFLKGCEKLSDKVLEKLAGPLTDLRGVKGRIECAVDALRFFMAREDEF
CRWFELRKGPLVKLCCSPLEVAESIKKAILDRFKTVVLTSATLAIGEKFDFLKHRTGIEL
LAKDRVSELLLPSPFDYAHQALVAVPSDMPEPTSPMFEARLCSHLLDALKISQGRAFVLF
TSYDLLIRVFNRLAEPLKAAGLTPMRQGETNRHMLLSKFRNSLNPVLFGTDSFWEGVDVQ
GRGLELVVITRLPFRVPTEPILEARSEHITAKGGDPFMSYTVPQAVIKFKQGFGRLIRSK
EDRGAVLILDSRVLTKNYGKIFLTALHGVTVQKAPEEEICRRLEAFFAPSPDSPSLDSHP
TP
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgcaaaagtacttttcagctctcgccatcgagcagctccgcactgcaatctcagaagca
aacggcaacgaagtcttctttttgggtcgcaccgacgaggcgcgcatcgtcgtcacggtg
gagccgctggcgcgcggcaacaaggacgccgtccccgccatcatgatcgcctgctctttc
ggcgacgtggtcatccacaaccacccctccggcaacctcaacccttcgcaacccgatatc
gagatcgcctcgctcctgggcaaccaaggggtcggcttctacatcgtcaacaacgacgcc
tcccgcgccaaccaggtggtcgcgcccttcgcgcgcaaggtggtggaacgcctctcctat
cccgaggtcgagcatttctacgcgcccgacggcgtgctggcccaggccctgcccggctac
gagcaccgtcccgagcaaagcaggatggcgctcaacctctcggaagcattcaacgaggag
aaggttgccatcgtcgaggccgggaccggcaccggcaagtcgctggcctacctccttccc
gccgccctctggtcggtgcgcaacaaggagcgggtggtcatctccaccaacaccatcaac
ctgcaggagcagctgatccagaaggacatcccgtttctgcagcagcacgccggcgtgcag
ttccgcgccgtgctggtcaaggggcgcggcaactacctctgcctgaggaagctgcgggtg
aacgccgccgacgcctccctcttcaaggacgacaccgcccaggagctggacgccatcgtc
gcctggagcaaaaagaccgaggacggctgccgcggcgacctggccttcatccccaaggat
gaagtatgggaagagctatgctgcgagtcggaccagtgcggacgggtgaagtgcccggag
tacccgcgctgcttcttctacaaggcccggcgcgaggcggccggcgccgacctcctcgtg
gttaaccacgccctgctcctcgccgacctctcggtgcgccaggagaccggctacgacgcc
accgccatcctcccccccttccaccggctcatcttcgacgaggggcatcacctggaggat
gtcgccaccaacttcctctccagccaggtctcgcgactggggctggtcaagctgctgggc
aaactgcaacacccaaggaaagcgcatcgcggcgtgctgccgcagctttccacgcagctc
tccgccgccgtaccggaatcgcaggacgacctctacctggagatcgccgaagtcctggaa
gggcgcctgatccccaggagggtcgcggtgctggaggcggtgacccgcggcatggaccag
atcggcgaggcgctgttcaggaaattgaagaaggacggggtcgagcagaagctgcgcgtg
acgccggcgatttataatacgcccctctggcatgaggtgacgccgcacatcgagaatatg
gccaaagagctttccgactacgccctggccatgcaggcgtttctgaagggatgcgagaag
ctttccgacaaggtgctggaaaagctggccgggccgctcaccgacctcaggggagtgaaa
gggaggatcgagtgcgccgtcgatgcgctgaggttcttcatggcgcgggaggatgagttc
tgccgctggtttgaattgagaaagggcccgctggtgaagctctgctgctctcccttagag
gtggccgagtcaatcaagaaggcgatcctggaccgcttcaagaccgtggtgctcacctcg
gccacgctcgccatcggggagaagttcgactttctgaaacaccgcaccggcatcgagctg
ctcgccaaggatcgggtcagcgagcttttgctcccctcccccttcgactacgcgcaccag
gcgctggtggcggtcccttccgacatgcccgagccgacctcacccatgttcgaggcgcgg
ctgtgcagccaccttttggacgcgctaaagatttcccaggggcgcgccttcgtgctcttc
acctcgtacgacctcctgatacgggtcttcaaccgcctggccgagccgctcaaggccgcc
ggcctcaccccgatgcgccagggggagaccaaccgtcacatgctcctctccaagttccgc
aactcgctcaaccctgtgctgttcggtaccgattctttctgggagggagtggacgtgcag
gggcgggggctggagttggtggtgatcacccggctgcccttccgggttcccaccgagccg
atcctggaggcgaggagcgagcacattaccgccaaggggggcgatcctttcatgagctac
accgtgccgcaggcggtgatcaagttcaagcagggcttcgggaggctgatccggagcaag
gaggaccgcggcgcggtattgatcctggattcgcgggtactgaccaagaactacggcaag
atcttcctcaccgcgctgcacggcgtcaccgtacagaaggcaccggaagaagagatctgc
cggaggctcgaagccttcttcgcgccgtccccggactccccctcccttgactctcacccc
accccctag

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