Geomonas paludis: M1B72_01795
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Entry
M1B72_01795 CDS
T08160
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
gpl
Geomonas paludis
Pathway
gpl02020
Two-component system
gpl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M1B72_01795
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M1B72_01795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpl03021
]
M1B72_01795
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gpl02035
]
M1B72_01795
Transcription machinery [BR:
gpl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M1B72_01795
Bacterial motility proteins [BR:
gpl02035
]
Flagellar system
Flagellar assembly proteins
Stator
M1B72_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7096
HrpB7
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
UPU36463
UniProt:
A0ABY4LI45
LinkDB
All DBs
Position
401069..401821
Genome browser
AA seq
250 aa
AA seq
DB search
MNCLLKAYEHEAQRGVPMSRDELVVTHLPLVKFIVDRIASSLPPHLDRDDLRSAAVIGLI
SAAERFDPSRGVQFKTFAEQRIRGTIMDELRAQDWLTRSLRDKFKKLEKEFSQLEQRLGR
NPSSDEVATAMGLELKDYFRLLEEIHLLSFVSLDDAWHDEDGAPFGLLDVLEDKGTESPQ
SQLIARQTVERLAEAIDSLPEKERIVITLYYYEELNLKEIGAVLDLTESRISQLHSQAIV
RLRGKMKRVA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcttcttaaggcgtatgagcatgaggcgcaacgcggggtcccgatgagcagg
gacgagctggtggtcacccacctcccgctggttaagtttattgtcgaccggatcgcctcg
tcactccccccgcatctcgaccgggatgacctgagaagcgccgcggtgatcggcctgatc
tccgccgcggaacgcttcgatcccagccgcggggtacagttcaagaccttcgccgagcag
cgcatccggggcaccatcatggatgaactgcgggcccaggactggctgaccaggagcctc
agggacaagttcaagaagctggagaaggagttctcccagctcgagcagcgcctggggcgg
aacccctccagcgacgaggtggccaccgccatggggctggagctcaaggactacttccgg
ctcctggaggagatccatctcctttccttcgtctccctggacgacgcctggcacgacgag
gacggtgcgccgttcggcctgctcgacgtcctcgaggacaaggggaccgagagcccgcag
agccagctcatcgcgcgccagaccgtggagcgcctggccgaggcgatcgactccctcccc
gagaaggagcgcatcgtgatcacgctctactactacgaagaactgaacctgaaggagatc
ggcgccgtgctcgatctcaccgagtcgcgcatctcgcagctgcacagccaggccatcgtc
aggctgcgcggcaagatgaagcgcgtcgcctag
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integrated database retrieval system
