Geomonas paludis: M1B72_03030
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Entry
M1B72_03030 CDS
T08160
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
gpl
Geomonas paludis
Pathway
gpl00550
Peptidoglycan biosynthesis
gpl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M1B72_03030
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gpl01003
]
M1B72_03030
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
M1B72_03030
Enzymes [BR:
gpl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
M1B72_03030
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M1B72_03030
Glycosyltransferases [BR:
gpl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
M1B72_03030
Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
M1B72_03030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
UPU36698
UniProt:
A0ABY4LJM8
LinkDB
All DBs
Position
691037..693115
Genome browser
AA seq
692 aa
AA seq
DB search
MLSRRYASLKKLVSPVLLVIVLALTCAVSAHASIATYPELPTGYTSIRVFDGQQRYVGRI
LPTQRYWVSIDRIPLFLRKALVATEDARFYEHGGIDVRGIARALVKDVVKGRLAEGGSTI
TQQLIKNKFLTGEKSLDRKVKEVQLAMDFEKKYTKDQILEMYFNEIYFGNGAWGIAQAAR
QYFDKNPEELTEAECAILAGVPKNPGRYNPLGDQAKVSARRSVVLSRMVAVKMITPQQKR
AIEARPATVIKPGQAQGYLDLVRKQLVERYGAHIVEQGGLDVISAMDVNLQKQAEQVLRE
GVKKVNPSLQGALICMDLKTGDVLAAVGGVDNGKGGFNRAFSAKRQPGSSIKPLIFAAAL
EQGYTPASLLDDTPVAYNKGNGQTWRPHNYEKKSFGELSLRQALAHSNNVITVKLLESLG
VNNFVTFAGRLGLTLRTPNDLSLALGTDEVTLNDLVSAYSPLANAGMRSEGRTIIRVFDR
NRKSWSENPSQVAPVLSPATAFVTTSMMKDVLTYGTAKGLKNFARQRPAAGKTGTTDDYR
DAWFVGYTPQLITGVWVGYDKPKPGGRGFTGGAVSAPIWERFMRVASQGKPAVDFTRPEG
VVAVNIDPSTGQLATPTCPTAQEEDFIAGTEPTTYCSKHGGDAIPPVAPAQPLQPGVTAP
GSEPPAKQPADEGGEDGDGTEGATGLEGDVLR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgctttcccgtcggtacgcatcactcaagaagctcgtctcccccgttctcctcgtcatc
gtgctggcgctcacctgcgccgtttccgcccacgcctccatcgccacctacccggaactc
ccgaccggctacacctcgatccgggtcttcgacgggcagcagcgttacgtcgggcgcatc
ctccccacccagcgctactgggtctccatcgaccggatcccgctcttcttgcgcaaggcg
ctggtcgccaccgaggacgcccgcttctacgagcacggggggatcgacgtgcgcggcatc
gcccgggcgctcgtgaaggacgtggtcaaggggaggcttgccgaggggggctccaccatc
acccagcagctgatcaagaacaagttcttaaccggcgagaagtcgctcgaccgcaaggtg
aaggaagtgcagctcgccatggacttcgagaagaagtacaccaaggaccagatcctggag
atgtacttcaacgagatctacttcggcaacggcgcctggggcatcgcacaggcggcgcga
cagtacttcgacaagaacccggaggaactgaccgaggcggagtgcgcgattttggccggc
gtgcccaagaacccggggcgctacaacccgctgggtgaccaggccaaggtgagcgcgcgc
cgcagcgtggtgctctcccgcatggtcgcggtgaagatgatcacgccgcagcagaaaagg
gcgatcgaggcccgtcccgccaccgtgatcaagccgggacaggcgcaggggtatctcgac
ctggtgcgcaaacagctcgtggagcgctacggggcgcacatcgtggagcagggcgggctg
gacgtgatctcggccatggatgtgaacctgcagaagcaggcggagcaggtgctgcgcgaa
ggcgtgaagaaggtgaaccccagcctgcagggggcgctcatctgcatggacctgaagacc
ggcgacgtgctggccgcggtggggggggtggacaacggcaaggggggcttcaaccgcgcc
ttctcggccaagcgtcagcccggctcctccatcaagccgctcatcttcgccgccgcgctg
gagcaggggtacaccccggcgagcctgctggacgacaccccggtcgcctacaacaagggg
aacggccagacctggcggccgcacaactacgagaagaagagtttcggggaactgtcgctc
cggcaggcgctggcccactccaacaacgtgatcacggtgaagctgctcgaatcgctcggc
gtgaacaacttcgtcacctttgccgggcgcctggggcttaccctgcgcacccccaacgac
ctctcgctcgccctcggcaccgacgaggtgaccttgaacgacctggtctccgcctactcg
ccgctcgccaacgccgggatgcgcagcgaggggcgcaccatcatccgggtcttcgaccgc
aaccgcaagagctggagcgagaacccgtcgcaggtggccccggtgctctcgccggccacc
gcgttcgttaccacctccatgatgaaggacgtgctcacctacggtaccgccaaggggctc
aagaactttgcccgccagcgccccgccgccggcaagaccggcaccaccgacgattaccgc
gacgcctggttcgtcggctacaccccgcagctgatcaccggggtgtgggtcggctacgac
aagcccaagccgggagggagaggcttcaccggcggcgccgtctcggcgccgatctgggag
cgcttcatgcgcgtcgccagccaaggaaaacccgccgtggacttcaccaggcccgaaggg
gtggtcgccgtcaacatcgacccttcaaccggccagcttgccactccgacctgtccgacc
gcccaggaagaggacttcatcgcggggaccgaaccgaccacctactgctccaagcacggc
ggcgacgcgataccgccggtcgctccggcccagccgttgcaaccgggtgtcaccgctccc
gggagcgagccgcctgccaagcagcccgccgacgagggcggagaggacggggatggaact
gagggcgctaccggtctcgagggggatgtgctgcgctag
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