Geomonas paludis: M1B72_03270
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Entry
M1B72_03270 CDS
T08160
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
gpl
Geomonas paludis
Pathway
gpl00470
D-Amino acid metabolism
gpl01100
Metabolic pathways
gpl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M1B72_03270 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
M1B72_03270 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
M1B72_03270 (alr)
Enzymes [BR:
gpl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
M1B72_03270 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
Precursor biosynthesis
Racemase
M1B72_03270 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UPU36744
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All DBs
Position
798728..799867
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AA seq
379 aa
AA seq
DB search
MDSRPTVVEIDLAALRHNFGLVKKKVPQGCGILAVVKADAYGHGFQYVSEELEKLGVDAF
AVAFLAEGVQLRMSGIYRPVLILGGIYPGEERRCIGLNISTALYSLEQAAALDRAALEIK
CYRKAKIHLKVDTGMGRLGVTWDKVPEFLEQLKQFKNLEMEGIFSHFASADELDPDGLNF
TRLQAERFNAAVTEARRQGFDPAYVHVANSAAILAADLPFCNLVRPGIILYGAAPSRDFV
DEQASLPVMKLKSRVAMLKWVEPGTSISYGRRYVADKRALIASVPVGYADGYCRSLTNKG
EALIRGQRARVAGTVCMDWIMLDVTDIEGVAVGDEVTLLGPDPMGDRISAEELAEKAGTI
PYEIMCGIATRRVRRVYIG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtcctacggtggttgagatagatctcgccgcactcaggcacaacttcggg
ctggtaaagaagaaagtgccgcaggggtgcggcatcctggccgtggtcaaagccgatgcc
tacggccacggtttccaatacgtctccgaggaactggaaaagctcggagtggacgccttc
gcggtggccttcctcgccgagggggtgcaactgcgtatgagcggcatctaccggccggtg
ctgatcctgggcggcatctatcccggcgaggagaggcgctgcatcggcctcaacatctcg
accgcgctctactcgctggagcaggccgcggcgctggaccgggcggcccttgagatcaag
tgctaccgcaaggccaagatccacctgaaagtcgacaccggcatggggcgcctcggcgtc
acctgggacaaggtgcccgagttcctcgagcagctgaagcagttcaagaacctcgaaatg
gaagggatcttctcccactttgccagcgccgacgaactcgacccggacggccttaacttc
accaggctgcaggccgagcgcttcaacgccgccgtcaccgaggcccgccgccagggattc
gacccggcttacgttcatgtcgccaacagcgccgccatcctcgccgccgaccttcccttc
tgcaacctggtgcggccggggatcatcctctacggtgccgccccgtcccgggatttcgtg
gacgagcaggcgtcgctgcccgtcatgaagctgaagagccgggtggcgatgctcaagtgg
gtggaaccgggcaccagcatcagctacggcaggcgttacgtagccgacaagcgtgccctc
atcgccagcgttcccgtggggtatgccgacggttattgtcgcagtctcaccaacaagggt
gaggcactgatccggggccagcgggctcgcgttgccggcaccgtctgcatggactggatc
atgctggacgtgaccgacatcgagggcgttgccgtgggtgacgaggtgaccctgttggga
ccggacccgatgggcgaccgtatcagtgccgaggagttggccgagaaagccggcaccatc
ccctacgagatcatgtgcggcatcgccacccgccgcgtgcgcagggtgtacatagggtaa
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