Geomonas paludis: M1B72_03715
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Entry
M1B72_03715 CDS
T08160
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gpl
Geomonas paludis
Pathway
gpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M1B72_03715 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_03715 (ung)
Enzymes [BR:
gpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M1B72_03715 (ung)
DNA repair and recombination proteins [BR:
gpl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M1B72_03715 (ung)
Prokaryotic type
M1B72_03715 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UPU36828
LinkDB
All DBs
Position
888903..889595
Genome browser
AA seq
230 aa
AA seq
DB search
MSTESQVRLETSWKNHLLDEFEKPYMRDLREFLRQEMSRRKVIYPKGSEYFNALNSTSFD
RVRVVILGQDPYHGPDQAHGLCFSVQHGIDAPPSLVNIFKEIQSDLGLAPADFRHGHLGA
WADQGVLLLNSVLTVEAGRAASHQGKGWEVFTDRVIALLNEKKEHVVFMLWGAYAQKKGA
VIDESRHLVLRAPHPSPLSAHRGFLGCRHFSQANAYLARHGLPPIDWRLP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaatcacaggtacgtctggaaacgagctggaaaaaccacctcctggacgag
ttcgagaagccctacatgcgggacctcagagagttcctgcgccaggagatgtccaggcgg
aaggtgatctatcccaaggggagtgaatacttcaatgccttgaattcgacctccttcgac
cgggtcagggtggtcatcctggggcaggatccctaccacgggccggaccaggcccacgga
ctgtgcttctccgtgcagcacgggatcgatgctccaccttcgctggtgaacatattcaag
gaaattcagagcgacctgggactggcgccggccgacttcaggcacggccacctgggggca
tgggcggatcagggcgtgttgctgctcaacagcgtgctgacggtggaggcgggcagggcg
gcttcgcaccaggggaaggggtgggaggttttcacggaccgggtcatcgccctgttgaac
gagaagaaggagcacgtggtcttcatgctgtggggtgcctacgcgcaaaaaaaaggggcc
gtcatcgacgagagccggcacctggtactgcgcgccccgcacccgtctccgctttcggcg
catcggggcttcctggggtgccgccatttctcgcaggccaacgcctacctggcccggcac
ggcctgccccccatcgactggcgcctgccctga
DBGET
integrated database retrieval system
