Geomonas paludis: M1B72_03785
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Entry
M1B72_03785 CDS
T08160
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gpl
Geomonas paludis
Pathway
gpl00500
Starch and sucrose metabolism
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
M1B72_03785 (glgX)
Enzymes [BR:
gpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
M1B72_03785 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
MAT1-1-2
Motif
Other DBs
NCBI-ProteinID:
UPU36841
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Position
903446..905578
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AA seq
710 aa
AA seq
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MTKSTGRAGRKNGELPKGNTSPLGATVTRGGVNFSVFARDCTGVELLLFDHADDTAPARV
ITLDPKCNRTYHYWHVFVPGIGAGQLYGYRVAGPFEPQRGRRFDPGKVLIDPYGRAIAVP
DGYCRGDACLPGDNAVSAMKSVVADPRGYDWEGDLPLKRPYSKTVIYEMHVAGFTKHPSS
GVAEEKRGTYAGLVEKIPYLKELGITAVELLPIFQFDPLDAPLGLRNFWGYSPVSFFAPH
AAYSSRKGPLGPLDEFRDMVKALHKAGIEVILDVVYNHTSEGDHNGPTFCFRGFANDVYY
SLDADGSYINHTGCGNTLNANHHVVRRLIIDSLHYWVKEMHVDGFRFDLASILSRDGQGR
PLKNPPILWDIESDPALAGIKLIAEAWDAGGLYQVGSFIGDSWKEWNGEFRDDVRRFLKG
DEGVVSRFAARMLASPDIYGHQEREPEQSINFVTCHDGFTLNDLVSYNDKHNEANGEQNR
DGSDANLSWNCGVEGATSDPAIEALRNRQVKNFMAVTLLALGTPMILMGDEMRRTQRGNN
NAYCQDNELGWFDWDRLAVHPDIYRFTRELIRARLRQSDTPVETLTLNQLLGQARLEWHG
VHLGTPDWSYQSHSIALTVWSASKHLVFHYMVNAYWEPLTFTLPPPRRLPGGAWHRWIDT
SLASPDDISPWESVPELGSDSYRLPPRSLVVLVAKRHSRNSSRPVAPAAP
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcgactggaagagcaggcaggaagaacggggaactccccaaggggaacacc
tcccccttgggcgccaccgtgacccggggcggggtcaacttcagcgtcttcgccagggac
tgtaccggtgtggagctgctcctcttcgaccacgccgacgacaccgcccccgcccgtgtc
attacgctcgatcccaagtgcaaccgcacctatcactactggcacgtcttcgttcccggt
atcggcgccggccagctctacggctaccgcgtcgcgggtcccttcgagccgcagcggggg
cgccgcttcgatcccggcaaggtcctcatcgacccctatggccgcgccatcgccgtcccc
gacgggtactgccgcggcgacgcctgcctccccggcgacaacgcggtaagcgccatgaag
agcgtggtggcggacccgcgcggctacgactgggaaggcgacctccccctcaagcgcccc
tattcgaagacggtcatctacgagatgcacgtcgccggctttaccaagcacccctcctcc
ggcgtcgccgaggaaaagcgcggcacctacgccggtctggtcgagaagatcccgtacctg
aaggagctgggcataaccgccgtcgaactgctgccgatattccagttcgacccgctcgac
gcccccctggggctgcgcaacttctgggggtacagcccggtctccttcttcgcgccgcat
gccgcctacagctcccggaagggaccgctggggccgctggacgagttccgcgacatggtc
aaggcgctgcacaaggcgggcatcgaggtgatcctggacgtggtctacaaccacacctcc
gagggggaccacaacggccccaccttctgcttccgcggcttcgccaacgacgtctactac
tccctcgacgccgacggcagctacatcaaccacaccggctgcggcaacacgctgaacgcc
aaccaccacgtggtgcgccggctgatcatcgactccctgcattactgggtcaaggagatg
cacgtcgacggcttccgcttcgatctcgcctccatcctttcccgcgacggtcagggacgc
ccgctcaagaacccgcccatcctctgggacatcgagtccgaccccgcgctggccggcatc
aagctgatcgccgaggcctgggacgccggcggcctgtaccaggtggggagcttcatcggc
gacagctggaaggaatggaacggcgagttccgcgacgacgtgcgccgcttcctgaaaggg
gacgagggggtggtatcgcgcttcgccgcccgaatgctggcgagccccgacatctacgga
caccaggagcgcgagccggagcagagcatcaacttcgtcacctgccatgacggcttcacg
ctcaacgacctggtcagctacaacgacaagcacaacgaggccaacggggagcagaaccgc
gacggctccgatgccaacctgagctggaactgcggcgtcgagggggcgacctcggatccc
gccatcgaggcgctgcgcaaccgccaggtgaagaacttcatggcggtcaccctgctcgca
ctggggaccccgatgatcctcatgggcgacgagatgcgccgcacccagcgcggcaacaac
aacgcctactgccaggacaacgagctgggctggttcgactgggaccggcttgcggtccat
ccggacatataccgcttcacgcgggagctgatccgggcgcgcctcaggcagagcgacacc
ccggtggagacgctgacgctgaaccagctcctggggcaggcgcgcctggagtggcacggc
gtccacctcggcaccccggactggagctaccagtcccacagtatcgccctcaccgtgtgg
agcgcctcgaaacacctcgtattccattacatggtcaacgcctactgggagccgctcacc
ttcacgctaccgccgccgagaaggcttccgggcggtgcctggcaccgctggatcgacacc
tcgctggcgtcccccgacgacatctccccctgggagagcgtgccggagctgggctccgac
agctaccggctgccgccgcgcagcctggtggtgctggtggcgaagcggcactcgagaaat
tcctcccggccggttgccccggccgccccgtga
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