Geomonas paludis: M1B72_04115
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Entry
M1B72_04115 CDS
T08160
Name
(GenBank) Ni/Fe hydrogenase subunit alpha
KO
K14126
F420-non-reducing hydrogenase large subunit [EC:1.12.99.-
1.8.98.5
]
Organism
gpl
Geomonas paludis
Pathway
gpl00680
Methane metabolism
gpl01100
Metabolic pathways
gpl01120
Microbial metabolism in diverse environments
gpl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
M1B72_04115
Enzymes [BR:
gpl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
M1B72_04115
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GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
UPU36903
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Position
complement(970652..972067)
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AA seq
471 aa
AA seq
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MKKTLKIDPVTRIEGHAKVFIDLDAAGKLESAGLVVNELRGFEKILIGMEADRMPHVTAR
ICGVCPTAHHLAACNALDNAAGVAPPPAALLLRELMYLGHIIHSHSLSIFVLQGPDLVLG
LDAEPGQRNIVGIVAANPELAKMALALRSIGQRINEMVGGRGTHPVTSVAGGIAFVLEKE
KHKVLKGWVAEAKKLLPKVAPAVKGLLLKALQDHPAMAADWVVPSWGLGTVHEDRVSLIQ
GKLRAIDEQGAARAEFGVEEYHRYLQESVVEWSYMKKVRLNLDGELHDYRVGPMARMNVA
RRFGTELADAEYAEFCRLGGTPCHTTVFQTYAKLIEIIWAVERAEEILREKEIWGETRVP
VRFQGGRGVGHVEAPRGTLIHDYQIDDQGIVRSANLIVATQQNYSIINRSIEQSAQSHVI
DRPNDQALMNAVEFSIRCYDPCLSCATHAVGRMPMQVIIRKDGETVRTLRR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgctgaagatcgacccggtcaccaggatcgagggacacgccaaggtgttc
atcgacctggacgccgccggaaagctggagagcgcggggctcgtggtgaacgagctcagg
ggattcgaaaagatcctgatcggcatggaggcggaccggatgccgcacgtcaccgcccgc
atctgcggggtctgtcccacggcgcaccaccttgccgcctgcaacgcgctcgacaacgcc
gccggggtggccccgccgccggccgccctcctgctgcgggaactcatgtatctcgggcac
atcatccattcccactccctctccatcttcgtgctgcaggggccggacctggtgctgggg
ctggatgccgaacccgggcagcggaacatcgtggggatcgtggcggcgaacccggaactg
gcgaagatggcccttgccctgcgcagcatcgggcagcgcatcaacgagatggtcgggggg
agaggcacccaccccgtcacctcggtggccggcggcatcgccttcgtcctggagaaggaa
aagcacaaggtgctcaaggggtgggtcgccgaggcgaaaaagctcctccccaaggtggcg
ccggcggtgaaagggctcctgttgaaggcgctccaggatcacccggccatggccgccgac
tgggtggtcccctcctgggggttgggaacggtccacgaggaccgggtctccctgatccag
gggaaactgcgcgcgatagacgagcagggggcagcgcgggccgagttcggcgtcgaggag
tatcaccgctacctgcaggagtcggtggtggaatggtcctacatgaagaaggtgcgactg
aacctggacggggagctgcacgactaccgggtggggcccatggcgaggatgaacgtggcg
cgccgtttcgggaccgaactcgccgacgccgagtacgccgagttctgccgcttggggggg
accccctgccacaccaccgtcttccagacctacgcgaagttgatcgagatcatctgggcc
gtggagcgggcggaggagatcctgcgcgagaaggagatctggggcgagacccgggtcccg
gtccgtttccagggcggcaggggcgtggggcacgtggaggcgccgcgcggcaccctgatc
cacgactaccagatcgacgaccaggggatcgtgcggagcgccaacctcatcgtcgccacc
cagcagaactattccatcatcaaccgctccatcgaacagtcggcgcagtcgcacgtgatc
gaccgccccaacgaccaggcgctcatgaacgcagtggagttcagcatccgctgctacgac
ccctgcctctcctgcgccacccatgcggtggggcgcatgcccatgcaggtcatcatccgt
aaggacggggaaaccgtccgcaccctgaggaggtag
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