Geomonas paludis: M1B72_04270
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Entry
M1B72_04270 CDS
T08160
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpl03016
]
M1B72_04270 (truA)
Enzymes [BR:
gpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
M1B72_04270 (truA)
Transfer RNA biogenesis [BR:
gpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M1B72_04270 (truA)
Prokaryotic type
M1B72_04270 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
UPU36934
LinkDB
All DBs
Position
1011196..1011948
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AA seq
250 aa
AA seq
DB search
MRNIKLIIEYDGTAYAGWQVQPNGLTIQEVMEKALAKMLGEHATLHASGRTDAGVHARGM
VACFKTERTMPLRAFREGLNSLLPSDIAVRDAAEVPLDFHARFNAQAKHYRYTMLLDDLR
SPLVRHTAWRVKGKLDIEAMRAACRLFVGEHDFAAFRGANCAAKTTVRRIYSMELVQEGR
LLHLDINGSGFLKNMVRIITGTLIEVGQGRLSADDVARLLKGGDRQNAGMTVPPQGLCLM
QVFYPAQSGE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacatcaagctgatcatagaatacgacggcaccgcctatgccggctggcaggtg
cagcccaacgggctgaccatccaggaggtcatggaaaaggcactggccaagatgctcggg
gagcatgccaccctgcacgcctccggccgcaccgacgccggggtgcacgcccgcggcatg
gtggcctgcttcaagaccgagcgcaccatgccgctgcgcgccttccgcgaggggctgaac
tcgctgctccccagcgacatcgccgtgcgcgacgccgccgaggtgccgctcgacttccac
gcgcgcttcaacgcgcaggcaaagcactaccgctacaccatgctgctcgacgacctccgt
tcgccgttggtgcgccacacggcgtggcgcgtcaagggaaagctcgacatcgaggcgatg
cgcgcggcctgcaggctcttcgtcggcgagcacgacttcgccgcctttcgcggcgccaac
tgcgccgccaagaccaccgtgcgccgtatctatagtatggagttggtgcaggaggggcgc
ctgctgcacctcgacatcaacggcagcggtttcctgaagaacatggtgcgcatcatcacc
ggcacgctcatcgaggtggggcagggcaggctgagcgcagacgacgtggcgcgcctgctc
aaagggggcgaccggcagaacgcgggaatgacagtgccgccgcaagggctctgtctcatg
caggttttctacccggcgcagagcggggaatga
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