Geomonas paludis: M1B72_06560
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Entry
M1B72_06560 CDS
T08160
Name
(GenBank) pilus assembly protein PilY
KO
K02674
type IV pilus assembly protein PilY1
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gpl02044
]
M1B72_06560
02035 Bacterial motility proteins [BR:
gpl02035
]
M1B72_06560
Secretion system [BR:
gpl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
M1B72_06560
Bacterial motility proteins [BR:
gpl02035
]
Pilus system
Pilus assembly proteins
M1B72_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ_3
Motif
Other DBs
NCBI-ProteinID:
UPU37362
LinkDB
All DBs
Position
1526169..1530776
Genome browser
AA seq
1535 aa
AA seq
DB search
MGKGRVPAPVRAGVVILCLSVCVLLSVARQAQADAAADMQAYCSVPPLPGVKPNLLLLLD
NSASMYDLAYTTPQTFCLDDSFDPAASYPGYFQQGTVYQYSTATDRFVAAAGTGIDSSAC
NQAKAAYVCVNLNKTSKKLDNFIATGKFLNWLAMSKLDLEKLALTGGKYDPGTGLLQAES
RGCLGKRYVKMVKDANGTPLPVTFGVRGPIPAETGYVQQGNHGGPSRIDIYPAAYNKSDC
LLAVQKWQERAPASEVATAAATCMGKLEDPVGVPTAGKVFAEIMSYCYNYLAGTDIIYSD
LLNNLLPDCRKRYVFFYSAQPTKIPKNVGDDVCGKDLFHSLLYHGSTASTQGYLGQCYSQ
GGFGEECSVNQTKDFCAEVEKPWLDDPSANAAQAGTNASLPAFILDAGITNLGKVTATLQ
VRLAPPAAPTGLIQQFADDINFGAMIFNDNGAGSECGAIPCVKHCSSDPAPRRECYSDGD
CGTGTCSEDTRTDGGRIISYINYGEAGDHGKGLVAAVDAVRGTSWTPLAEAFYEAIGYYA
EKGTFRLQSGDFDPAYPPSKYSCQRNNILIVTDGMSSADRAAAVNSYLAAATAAWVNPAD
GMPASLTTTASTPAGSPPENLGSYNLDDLAWIARHKNIFDPAQPIARHKDYITTHVVYTG
PPCGDPASRAGYDADGNCTTSDEGKPEKLMQLTAANGGGGIRSVYNPAGLQSALVTVLLQ
IAGGFNTGTSSSLLATGEGNGALFLQPQYYPQKSFDGGKTSGIWIGELQTLWYYIDNFMG
GGSGGGSRIREDTRGNKVLDLKLDRVVEFTVDPALKESRARLSVDADGDGSVDPVQAAGY
PLTVLPEAVQSLWRAGRQLWERAPETRTIYTQTGGTSLVPFLDTSSAVNRQLLLAQDQAE
ANQIVAFVKGSDDIKGESGAATRDRRLNAYGGTGTKVWKLGDIISSTPVLQSAAPLGSYH
LTGPAGYGDLSYRKFIDQPAYAGRGTVYVGANDGMLHAFRLGQSRVHPVDQEVWPRTQKA
VLDGSDPGKEEWAFVPKNALPYLRYLKEPPYLHLYYVDGAGTLLDASLGDPALCSRDRYW
DCAKDNSAGSNWRTVLIGAMGLGGASRLPDGPACVDAGATATCVKAPAAGVGGLSSYFAL
DVTTQAGDGSGTPRFLWEFSHPDLGFATSGAAIIRVKARTVNGQNQEVHDPDKNGRWFAV
FASGPTGAVDRKTRQFTAVSDQPLRLFVVDLNAVPPLTQGRNYWVIETDIPNAFGGSMAG
AGIDADKWSGSADGNYEDDALYVGYTRAATGGGWTGGVLRLLTYEDPDPAHWKPGIVIDD
VGPVTGAIGKLQDRQYKRLWLYFGAGRYFNRDDDLSAARALYGVSEPCYDAGKNTFFKGA
GSCSSATLRLSDLTDVTDVARVVQPRDQGESYHGWVIKLDAASGTFGSERAIDSPTTLTG
GAVFFPTFQPSLDPCQEGVSYLWGAHYSTGGPTRSLSAQALMPLSSGGIPSLDIALMPDR
DHRRTPPQTGKGVKPRLVTNSGLKALKKIIHIQER
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggggagagtgcctgcgcccgtgcgcgccggcgtggtgattctttgcctgagc
gtctgcgtgcttttgtctgtggcgcgccaggcgcaagccgacgcggctgcggacatgcag
gcctactgcagcgtcccgccccttcccggggtgaagcccaacctgctgcttttgctggac
aactcggcgagcatgtacgacctcgcttacacgaccccgcagaccttctgccttgacgac
agcttcgaccctgccgccagttatcccgggtatttccagcagggcaccgtctaccaatat
tccacggccaccgaccgcttcgtggccgctgccgggaccggcatcgacagtagcgcctgc
aaccaggccaaggccgcctatgtctgcgtcaacctcaacaagaccagcaagaaactggac
aatttcatcgccaccggcaagttcctcaactggctcgccatgagcaagctcgacctggaa
aagctggccctgaccggcggcaagtacgacccggggacgggcctgctgcaggcggagtcg
cgcggctgccttgggaagcgctacgtgaagatggtcaaggacgccaacggcacccctctg
ccggtcaccttcggggtgcgcgggccgatccccgccgaaacagggtatgtgcagcagggc
aaccacggcggcccgagccgaatcgacatctaccccgcggcctacaacaagagcgactgc
cttttagccgtgcagaaatggcaggagcgggcaccggccagcgaggtggctaccgccgcc
gccacctgcatgggtaaactggaggaccccgtcggcgtgccgaccgccggcaaggtcttc
gccgagatcatgagctactgctacaactacctggccggcaccgacatcatctacagtgac
ctgttgaacaacctgctgcccgattgccgcaaacgctacgtcttcttctacagcgcccaa
ccgaccaagatacccaagaacgtcggggacgacgtctgcggcaaagacctgttccacagt
ctcctgtaccatggcagcaccgcctcgacccagggatacctcgggcagtgctacagccaa
ggtggcttcggcgaggaatgctcggtgaaccagaccaaggatttctgcgccgaggtggag
aaaccgtggctcgacgacccatcggccaacgccgcgcaggccggaaccaacgcgagcctc
cccgccttcatcctggacgcggggatcaccaacctcggcaaggtcacggcaacgctccag
gtccggctggccccgccagcggcgccgacggggctgatccagcagttcgccgacgacatc
aacttcggcgccatgatcttcaacgacaacggggccggctccgagtgcggcgccattccc
tgcgtgaagcactgcagcagcgatccggcgccgcgcagggaatgctactccgacggcgac
tgcggtaccgggacctgcagcgaggacacccgtaccgacggggggcggatcatctcctat
atcaactacggggaggccggcgaccatggcaaggggctcgtcgcggccgtggacgccgtc
agggggacgtcctggacgccgctggccgaggctttctacgaagcgatcgggtactatgcg
gaaaaggggaccttccgtctccagtccggcgacttcgacccagcctatcccccttcgaag
tacagctgccagagaaacaacatcctcatcgtcaccgacggcatgtcgagcgcggaccgt
gccgccgccgtcaacagctacctggccgcagccacagcggcctgggtcaatcccgccgac
ggcatgcccgccagcctcaccaccaccgcgagcacgcccgccggatcccccccggagaac
ctcggcagctacaacctcgacgacctggcctggatcgcccggcacaagaacatcttcgac
cctgcccagcccatcgcgcggcacaaggattacatcaccacccacgtggtctacaccggc
cccccctgcggcgatcctgccagcagggccgggtacgacgccgacggcaactgcaccacg
tccgacgagggaaagcccgagaagctgatgcagctgaccgccgccaacggggggggaggc
atcaggagcgtctacaacccggccggcctgcagagtgcgctggtgacggtgctgctgcag
atcgccggaggtttcaacacgggaaccagcagctcgttgctggcaacgggggaggggaac
ggggccctgttcctgcagccccagtactatccgcagaagagcttcgacggcggcaaaacc
tccgggatctggatcggagagctgcagacgctctggtactacatcgacaacttcatgggc
ggcggctccggggggggcagccgcatcagggaggacacccggggcaacaaggtcctcgat
ctgaagctggaccgggtggtcgagttcaccgtcgatcccgccttaaaggagagtcgtgcc
aggctctccgtcgatgcggacggcgacggcagcgtcgatccggtccaggccgcggggtac
cccctcaccgtcctccccgaggcggtgcagagcctgtggcgcgcggggcgccagctctgg
gaacgtgccccggagaccaggaccatctacacccagaccggcggcacctccctggtcccg
ttcctggacacctcgtcggcggtcaaccggcagctgctcctggcccaggaccaggcggaa
gcgaaccagatcgtggctttcgtcaaggggagcgacgacatcaagggggagagcggggcc
gccaccagggaccgccggctcaacgcctatggcgggaccgggaccaaggtctggaagctc
ggcgacatcatctcgtccaccccggtactgcagtcggcggcccccctggggagctatcat
ctcacggggccggcgggctacggggacctctcctaccgcaaattcatcgatcaaccggct
tacgccggccgcggcaccgtgtacgtcggggccaacgacggcatgctgcatgccttcagg
ctgggacagagccgggtgcacccggtcgaccaggaggtatggccccgcacgcagaaagcg
gttctggacgggagcgatccgggcaaggaggagtgggccttcgtccccaaaaacgcgctc
ccctacctcaggtacctcaaggagcccccttacctgcacctgtactacgtggacggcgcc
ggtacgcttctggacgcaagcctgggcgaccccgccctgtgcagccgcgacaggtactgg
gactgcgccaaggacaacagcgccgggagcaactggcgcacggtcctgatcggcgccatg
gggctcgggggcgccagccgcctccccgacggccccgcctgcgtggacgccggggccacg
gcgacctgcgtcaaggcgccggctgccggcgtgggcgggctttcctcctacttcgccctg
gacgtcaccacccaggcgggcgacggctccggcaccccccggttcctgtgggagttctcc
cacccggacctcggcttcgccacctcaggcgccgccatcatccgcgtcaaggcgcgcacc
gtcaacggtcaaaaccaggaggttcacgatccggacaagaacgggcgctggttcgccgtc
ttcgcctcgggaccgaccggagcggtcgacaggaaaacgcgccagttcaccgcggtgtcg
gaccagcccctgaggctcttcgtcgtggacctgaacgccgtaccgccgctcacccagggg
cgcaactactgggtcatcgagaccgacatacccaacgccttcggcggcagcatggccggc
gccgggatcgatgccgacaagtggagcggctctgccgacggcaattacgaggacgatgcc
ctctacgtcggttacaccagggccgccaccgggggagggtggaccggcggggtgctgagg
cttttgacctacgaggacccggacccggcccactggaaaccgggcatcgtcatagacgac
gtcggtccggtcaccggggccatcggcaagctccaggaccggcagtacaagcgcctgtgg
ctctacttcggcgccggaagatacttcaacagggacgatgacctctcggcagcgcgcgcc
ctctacggtgtcagcgagccctgctacgacgccggtaagaacaccttcttcaagggggcc
ggttcctgcagcagcgcgacgctgcgcctgtccgacctgaccgacgtcaccgatgtcgcc
agggtggtgcagcccagggaccaaggggagagctaccatggctgggtgataaaactcgac
gccgcctccggcaccttcggcagcgagcgcgccatcgacagcccgaccaccctgaccgga
ggcgcggtcttcttcccgaccttccagccgtccctggatccctgccaggagggggtctcc
tacctgtggggggcccactacagcaccggcggccccaccaggtcgctgtcggcccaggcc
ctgatgccgctctccagcggcggcatccccagcctcgacatcgctctcatgccggaccgc
gaccaccggcgcacccctccccagaccggcaaaggggtcaagccccgcctggtcaccaac
agcggcttgaaggctttgaagaagatcatccatattcaggagcgctaa
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