Geomonas paludis: M1B72_06590
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Entry
M1B72_06590 CDS
T08160
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_06590
Transporters [BR:
gpl02000
]
Other transporters
Pores ion channels [TC:
1
]
M1B72_06590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
DUF3577
Myelin_MBP
DUF3348
Motif
Other DBs
NCBI-ProteinID:
UPU37368
LinkDB
All DBs
Position
1539251..1540672
Genome browser
AA seq
473 aa
AA seq
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MKKITGFICIMVLAVMALAATAHAGERAGAFSISPFVGGYIFDDSKLPQRTYRENRITGG
LRLGYDWTDNFATELVGSYLRVEDQATDRENGMYSYHLDLIWNFMPRSAFVPYLALGGGG
YTIRYHGANLHDGTANGGAGFKLFFNDDIAFRADARRIIDFQSSDIEENIARNWEYSIGL
TFVMGGRTMKAAPAKAAAAEPGGTVAQTPPPAQPEAQPQPQPVAAEPTPGHYKYCITLQG
EFDIDKAIVRQELRDQIAQVGNFMKKYPTTTAVIEGHTDNVGSYNHNMDLSQRRAQAVVD
VLAEQYGIERTRLAAKGYGFTRPIADNATNEGKQKNRRIEAIIDCAFDVQQVTPPERLCM
SLVVDFDSGKAEVKPQYRDEIAKVADYMKRYTTTTAVIEGHTDNTGDAAHNMKLSQQRAQ
NVVDYLVKNFGIERSRLSAKGFGSTRPIAYNKTAEGRQQNRRINAIIDCVVNK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatcaccggcttcatctgcatcatggtcctggccgtgatggcgctggccgcc
acggcgcacgccggagaacgtgcgggtgcgttctccatctcccccttcgtcggcggctac
atcttcgacgattcgaaactgccccagcgcacctacagggagaaccggatcaccggtggt
ttgcggctcggctacgactggaccgacaacttcgccaccgagctcgtggggagctacctg
agggtggaggaccaggccaccgatcgcgagaacggcatgtactcctaccacctggacctg
atctggaacttcatgcccaggtcggccttcgtcccctatctggccctgggcggcggcggg
tacaccatcaggtaccacggcgccaacctccacgacggcaccgccaacggcggcgccggc
ttcaagctgttcttcaacgacgacatcgccttcagggccgacgcccgccgcatcatcgac
ttccagagctccgacatcgaggagaacatcgccaggaactgggaatacagcatcggcctc
accttcgtgatgggtgggcggaccatgaaagccgctcccgccaaggctgcggcagccgag
ccgggcggcaccgtcgcccagaccccgccgccggcgcagcccgaagcccagccgcagccg
cagccggtcgccgccgagccgaccccggggcactacaagtactgcatcaccctgcagggt
gagttcgacatcgacaaggccatcgtgcgccaggagctgcgcgaccagatcgcccaggtg
ggcaacttcatgaagaagtatccgaccaccaccgccgtcatcgaggggcacaccgacaac
gtcggttcctacaaccacaacatggatctctcccagcgccgcgcccaggccgtggtcgac
gtgctggccgagcagtacggcatcgagcgcacccgtcttgccgccaaggggtacggcttc
acccgccccatcgccgacaacgccaccaacgaagggaagcagaagaaccgccgtatcgag
gccatcatcgactgcgccttcgacgtgcagcaggtcaccccgccggagcggctgtgcatg
tccctggtggtcgacttcgactccggcaaggccgaggtcaagccgcagtaccgcgatgag
atcgccaaggtcgccgactacatgaagcgttacaccaccaccaccgcggtcatcgagggg
cataccgacaacaccggcgatgccgcccacaacatgaagctgtcccagcagcgcgcccag
aacgtggtcgactacctggtcaagaacttcggtatcgagcgctcccgcctctccgccaaa
gggttcgggtccacccgccccatcgcctacaacaagacggcggaagggcggcagcaaaac
cgcaggatcaacgccatcatcgactgcgtcgtcaacaagtag
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