Geomonas paludis: M1B72_07580
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Entry
M1B72_07580 CDS
T08160
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gpl02044
]
M1B72_07580
02035 Bacterial motility proteins [BR:
gpl02035
]
M1B72_07580
Secretion system [BR:
gpl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
M1B72_07580
Bacterial motility proteins [BR:
gpl02035
]
Pilus system
Pilus assembly proteins
M1B72_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dickkopf_N
DUF6911
Relaxase_M
Motif
Other DBs
NCBI-ProteinID:
UPU37557
LinkDB
All DBs
Position
1790782..1796463
Genome browser
AA seq
1893 aa
AA seq
DB search
MKNKLLLAASFLALTCALQPAPAHATLSWPGEPYCVKPAFVAGNVSPNLLLMIDNSASMY
DLQYVDEGKKHCSNSSTSCTSNADCSNGGTCSVFDRRPFYCYDQTFDSTKNYYGYFNKDK
FYYYYKKQDDGTGDEFRPVAGSTLAQALSVVSCGANGTNINKTFPGQMCLEYTTGKALVA
FVAKGNYLNWLTASKLDAEKQTLTGGKFDGSYFIPESRGCVGQAFVKDQNTADFINFADG
TPDPNASLQVTYTITGPSNEYNSTAPSNGGQTYINLFGGATFNYGNCQDAINALATGGNA
DIKQTVDSCLASTAPATGTCQNVPAALRPFAACTTNSDCNLNKSIDTNAYVCQTYLGKTC
TGLADTTSCKIAARNSCTVDPTIACGVDSDCNVAVAATPGHCSTDKSMYTPAPGSKDDVP
AISCTTDADCKFKSTGTNFVGKINSCVGYTAASTSYKGPCVVTAAQDYGPCVANYVGDCQ
LTAQGAATKTKVSFQQSMQECWKIRGQTYTANSNPPYGFTNMQTVLQQCPDIYASYKTCH
NDHMKQCTSSADCGGAACDSGPDAIGAGNPALLCGASYEGPFFTKNASGNWVVTAAGSAD
SYLAMKEAQYRFCGDMASPPVTDPTDSPSDTAITENMPAILSGIGVEAQLGAPIQKMRVK
IGATSCTTVSDCGTTNPERSFTCTSGTCQPIGLVQEFSDKIRLGVATFNPFGSASETALA
GVKDAKVCYVGAGSTQVTPVQACVQNIDCGTGNRCDVASGNANLDGGAIIYPVGKGVCAT
MTGTACTTNAQCSGTNTCLNGFCGSKSTDVCTTVSNCSGSSQACVRDTAGAHTASDTLVG
KIDGIRAASWTPLAETLYNVLGYFAAIPQTGGSLKSRVTGAATGLTGLRINAIDTTSVTN
AVDFNEVLHPSEYRCQQNYVLLVSDGSSTADRNTTVGNLASLYAAQAGTTAGACTVPSGS
VDHGGTSNLPVISWLGRHQNLASFSTTAVTPVHCSGHTSTTCTRDSDCPSGETCQNGTYP
RDYFTTYVVLNGESTGTSDVCSAEMLLGKTASNGGTTLEMAKDPVEQRDKLSTIFQTIAA
KASSGTAASILSNSEGSGANILQAVFFPKKVFENQSYSDWIGEMQNLWYYVDPQISRSTI
REDTNADKQLDLIADKVVSFRFDTTDNTTYAFASQDTNGDGIGDTTEVKEDTDLVKSIWR
AGKQLWSRNLSSSPRKIFTSINGTSLIDFSSDTFRGTANSDNSATLAPYLNVSAGEATRL
IDYVHGVDQNDLEGFASYRSRKVQIKDQATNTISSPREWRLGDIISSTPRIQSTGKLNTY
NVAAPSGYGDASYTSFINSYQYKHRGMVYVGGNDGMLHSFKLGLLDVTASSTHKATLTGS
ALGEEQWAYIPKQVLPFLKYYGDPKYNHLYYVDGSTVLFDASIGTTTLNTDTNTNICPDG
ATYYDCPKQASVVNATNELDPTRNTWRTVLIGGMGIGGASTKTCASGAECVQTPVAEDPS
DTSKALGYSTYFALDVSDPEAPSLMWEFNDPAMGFATTGPAVVRVGPRDKNGHWYAVFGS
GPTGKIDTNNNQFKGQSNQTLKFFIVDLRTGTLLRTIDTGIENAFAGSMLGGPIDADRWD
SYANGHYQDDAILVGYTKKNTTTNTWSDGGVIRITTKESSTVNNWGWSHVIEDTGPVVTA
ISRLQDRKNKRLWLYFGSGRYYYRAGTDIDDFSNQRSIYGIKDPCYNTNALPGNVYDKNC
TATVTSGVTDQSEEITSVGAGGWKIDMDLSSGNFGAERVVTDAVALTNGTVFLTSFQPTA
DPCGFGGNSFLWALGYDTGDRPSDAALAGKALIQLSTGEFKEVDLAQAFGSGAARLNRRS
GVPMTGKPPADAFPIVSKSGNKPVKKIMHIQER
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaactgctccttgctgcttctttcctggccttgacctgcgccctgcaaccg
gcgccggcccacgccacgctttcctggcccggcgagccgtactgcgtcaagcccgccttc
gtcgccggcaacgtgtcgccgaacctgttgctcatgatcgacaactcggccagtatgtac
gacctgcagtacgtggacgaggggaagaagcactgctccaactcctccacctcctgtacc
tccaacgccgactgctcgaacggcggcacctgcagcgtcttcgaccgccgtcccttctac
tgctacgaccagaccttcgacagcacgaagaactactacggttatttcaacaaggacaag
ttttactactactacaagaagcaggatgacggaaccggcgacgagttcaggccggtagcg
ggaagcacgctcgcgcaggccctgtcggtcgtgtcctgcggcgccaacggcaccaacatc
aacaagaccttcccggggcagatgtgcctcgagtacaccaccggcaaggcgctggtcgcc
ttcgtggccaaggggaattacctcaactggctcaccgcttccaagctcgacgccgagaaa
cagaccctgaccggcggcaagttcgacggcagctacttcatccccgagtcgcgcggctgc
gtggggcaggccttcgtcaaggaccagaacaccgccgacttcatcaacttcgccgacggc
acgccggacccgaacgcctcgctccaggtgacctacaccatcaccgggccgtccaatgag
tacaactcgaccgcaccctccaacggcggccagacctacatcaacctgttcggcggggcg
actttcaactacggcaactgccaggacgccatcaatgccctcgccaccggcggcaacgcc
gacatcaagcagacggttgattcctgcctggccagcaccgcgcccgccaccggcacctgt
cagaacgttcccgccgccctgcgaccctttgcggcttgtacaaccaactctgattgcaac
ctcaacaaatcaatcgacacaaatgcctacgtctgccagacgtacttgggaaaaacctgc
accggtctggccgacaccacctcgtgcaagatcgccgccaggaactcctgcacggtcgac
cccaccatcgcctgcggcgtcgactccgactgcaacgtcgccgttgccgccacacccggc
cactgctcaaccgacaagtcgatgtacacccctgcaccggggagcaaggacgatgtgccg
gctatttcctgcaccacggacgcagactgcaagttcaagtcgaccgggaccaacttcgtc
ggcaagatcaactcctgcgtcggatacaccgcggcaagcacttcctacaaggggccctgc
gtggtcaccgccgcccaggattacggcccgtgcgtcgccaactacgtcggcgactgccaa
ctcaccgcgcagggggccgccaccaaaaccaaagtcagcttccagcagtccatgcaggaa
tgctggaaaattagggggcagacttatacagctaacagcaaccctccctacggtttcacc
aatatgcaaactgtcctacagcagtgccccgatatctacgcctcgtacaagacctgtcac
aacgaccacatgaaacagtgcaccagcagtgccgactgtggcggggcagcctgcgactcc
ggtccggacgccatcggtgcgggtaacccggcactgctttgcggtgccagctatgaaggg
ccgttcttcaccaagaacgcgagcggtaactgggtggtcaccgccgccggctccgccgac
agctacctggctatgaaggaggcgcagtatcgcttctgcggtgacatggcgtcccctccc
gtcaccgacccgaccgactccccctccgatacggcgattaccgagaacatgccggccatc
ctgagcggcatcggggtggaggcgcagcttggcgcaccgatccagaagatgagggtgaag
atcggcgccacttcgtgcacgacggtcagcgactgtggcactaccaacccggagcgcagt
ttcacctgcacgtccggcacctgccagcccatcggcctggtccaggagttctccgacaag
atccgcctcggggtggccactttcaaccccttcggctccgcatccgaaaccgcgcttgcc
ggcgtcaaggacgccaaggtctgctacgtcggggccggcagcacccaggtgacaccggta
caggcctgcgtccagaacatcgactgtggcaccggcaaccgctgcgacgtcgcctccggt
aacgccaacctcgacggcggcgccatcatctacccggtcggcaaaggggtctgcgccacc
atgaccggcaccgcctgcaccacgaacgcccagtgcagcgggaccaacacctgtctcaac
ggcttctgcggcagcaagagcaccgacgtctgcaccacggtgagcaactgctccggctcc
tcccaggcctgcgtccgcgacactgccggtgcccataccgcgtccgataccctggtgggg
aaaatcgacggcatcagggccgcttcctggacgccgctcgccgagaccctgtacaacgtg
ctcggctacttcgccgccatcccgcaaacgggggggagcctgaaaagccgcgttaccggc
gccgccaccgggctcaccggcctgcgcatcaacgccatcgacaccaccagcgtcaccaac
gccgtcgacttcaacgaggtcctgcacccctccgagtaccgctgccagcagaactacgtg
ctgctggtaagcgacggcagctccactgccgaccgcaacaccacggtcggcaacctggcc
agcctctacgccgcgcaggccggcaccacggccggcgcctgcacggtgcccagcggttcc
gtggaccatggcggcacctccaacctgccggtaatatcctggctcgggcggcaccagaac
ctggccagcttcagcaccacggcggtgacgccggtgcactgctcggggcacacctccacc
acctgcacccgcgacagcgactgcccgtccggggagacctgccaaaacggcacctacccc
cgcgactatttcaccacctacgtggtgctgaacggcgagtccaccggcaccagcgatgtc
tgctccgccgaaatgctcttgggcaagacggcaagcaacggcggcaccacgctggaaatg
gccaaagacccggtcgagcaacgcgacaagctctccaccatcttccagaccatcgccgcc
aaggcgtcctcgggtacggcggcctccatcctcagtaacagcgaggggagcggcgccaac
atcctgcaggcggtcttcttcccgaagaaggtgttcgagaaccagagctactcggactgg
atcggcgagatgcagaatctgtggtactacgtcgatccccagatcagccgttccaccatc
cgtgaggacaccaatgccgacaagcagctcgacctgatcgcggacaaggtggtgagtttc
cgcttcgacaccaccgacaacaccacctatgccttcgcgtcgcaggacaccaacggcgac
gggataggggatactaccgaggtcaaggaggacaccgacctggtcaagagtatctggcgc
gccggcaagcagctctggtcccgcaacctcagctccagtccgcgcaagatcttcacctcc
atcaacggcacctcgttgatagatttctcgtccgacaccttccggggtaccgcgaactcg
gacaactccgccacgctggcgccctacttgaacgtcagcgccggagaggcgaccaggctt
atcgactacgtgcacggggtcgaccagaacgacctggaggggttcgcctcgtaccgcagc
cgcaaggtccagatcaaggaccaggccaccaacaccatcagctccccccgcgagtggcgt
ctgggcgacatcatctcctcgacgccgcgcatccagtccacggggaagctgaacacgtac
aacgtcgccgcccccagcggttatggcgatgcctcctatacctccttcatcaactcgtac
cagtacaagcacagggggatggtctacgtcggcggcaacgacggcatgctgcacagcttc
aagctgggccttctggacgtgaccgcgagcagcacgcacaaggcgaccctgaccggctcc
gcactgggcgaggaacagtgggcctacatccccaaacaggtgctgccgttcctgaagtac
tacggcgaccccaagtacaaccacctctactacgtggacggctccaccgtcctcttcgat
gccagcatcggcaccacgacgctgaacaccgacaccaacaccaatatctgccctgacggg
gctacgtactacgactgccccaagcaggcctcggtggtgaacgccaccaacgagctcgac
cccaccaggaacacctggaggacggtactgatcggcggcatgggtatcggcggggcctcc
accaagacctgcgccagcggcgcggagtgcgtgcagaccccggtcgcggaggaccccagt
gacacctctaaggcgctgggctactcgacctacttcgccctcgacgtctccgacccggaa
gcgccgtcgctgatgtgggagttcaacgacccggccatgggcttcgccaccaccggcccg
gccgtggtcagggtgggaccgcgcgacaagaacgggcactggtacgccgtcttcggttcc
ggccccaccggcaagatcgacaccaacaacaaccagttcaagggacagtccaaccagacc
ctgaagttcttcatcgtcgacctgcgcaccggcacgctcttgcgcaccatcgacaccggc
atcgagaacgcctttgccggctccatgctgggcggccccatcgacgccgaccgctgggac
tcctatgccaacgggcactaccaggacgacgccatcctggtcggctacaccaagaagaac
accaccaccaacacctggagcgacggcggggtgatcaggatcaccaccaaggagagcagc
accgtcaacaactgggggtggagccacgtcatcgaggacaccgggccggtggtcaccgcc
atatcccggctccaggaccgcaagaacaagcgcctgtggctctacttcggctccggcagg
tactactaccgcgcagggaccgacatcgacgacttcagcaaccagcgttcgatctacggc
atcaaggacccctgctacaacaccaatgccctgcccggcaacgtctacgacaagaactgc
accgccacggtcacctccggggtcaccgaccagtccgaggagatcacctcggttggcgcc
ggcggctggaagatcgacatggacctgtccagcggcaacttcggcgctgagcgcgtggta
accgacgccgtggcgctcaccaacggcaccgtgttcctcacctcgttccagcccaccgcc
gacccgtgcggcttcggcggcaactccttcctgtgggcgctggggtacgataccggggat
agacccagcgacgcggccctggcgggcaaggcgctgatccagctctccaccggcgagttc
aaggaggtcgacctggcccaggccttcggcagcggggccgcgcgcctgaaccggcgctcg
ggcgtccccatgaccggcaagccgccggcggacgccttcccgatcgtcagcaagagcggc
aacaagccggtcaagaagatcatgcacatccaggagcgctga
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