Geomonas paludis: M1B72_07875
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Entry
M1B72_07875 CDS
T08160
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gpl
Geomonas paludis
Pathway
gpl00541
Biosynthesis of various nucleotide sugars
gpl01100
Metabolic pathways
gpl01250
Biosynthesis of nucleotide sugars
Module
gpl_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M1B72_07875 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gpl01005
]
M1B72_07875 (kdsA)
Enzymes [BR:
gpl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
M1B72_07875 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
gpl01005
]
Lipid A
M1B72_07875 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
UPU37615
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Position
1857402..1858226
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AA seq
274 aa
AA seq
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MVHEVSVGNVKIGGNRPLVLVAGPCVIENETATLRHAERLMSICNGVGMPLIFKASYDKA
NRTSVTAFRGPGMDEGLRILAKVKESLGVPVLSDIHSIEQVEPAADVLDVLQIPAFLCRQ
TDLLVAAAKTGKVVNVKKGQFLAPWDMKNVVGKIRSCENENIILTERGASFGYNNLVVDM
RSFPIMRSTGYPVIFDATHSVQLPGGEGTSSGGQREYVEFLSRAAVAAGVDGVFMEVHED
PERALCDGPNSVRLDDLPALLNKLKAIDAIVKQA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtccatgaggtctctgtaggtaatgtcaaaataggcgggaacaggccgctggtgctg
gtcgccggaccctgcgtgatcgagaacgaaacggcgacgctgcgtcacgcggagcgcctg
atgagcatctgcaacggcgtcggcatgccgctcatcttcaaagcctcctacgacaaggcg
aaccgcacctcggtcaccgctttccgcggtccgggcatggacgaggggctcaggatcctg
gccaaggtaaaggaatcgctgggcgttcccgtcctctccgacatccactccatcgagcag
gtggagccggcggcggacgtgctcgacgtgctgcagatcccggctttcctgtgccgccag
accgacctcctggtcgccgccgccaagaccggcaaggtcgtcaacgtgaagaaggggcag
ttcctggcgccgtgggacatgaagaacgtggtcggcaagatccgctcctgcgagaacgag
aacatcatcctcaccgagcgcggcgcctccttcggctacaacaacctcgtcgtggacatg
cgcagcttccccatcatgcgctccaccggctacccggtcatcttcgacgccacccacagc
gtccagctcccgggaggggaggggacctcgtcgggcggccagcgcgagtacgtggaattc
ctgtcccgcgccgcggttgccgccggtgtggacggcgtcttcatggaggtgcatgaggat
ccggagcgcgccctgtgcgacggtcccaactcggtgcgcctggacgacctgccggcactt
ctgaacaagctgaaggccatcgacgccatcgtgaaacaggcgtaa
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