Geomonas paludis: M1B72_10620
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Entry
M1B72_10620 CDS
T08160
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpl
Geomonas paludis
Pathway
gpl00061
Fatty acid biosynthesis
gpl00071
Fatty acid degradation
gpl01100
Metabolic pathways
gpl01212
Fatty acid metabolism
gpl02024
Quorum sensing
gpl04146
Peroxisome
Module
gpl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M1B72_10620
00071 Fatty acid degradation
M1B72_10620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M1B72_10620
09145 Cellular community - prokaryotes
02024 Quorum sensing
M1B72_10620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpl01004
]
M1B72_10620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpl04147
]
M1B72_10620
Enzymes [BR:
gpl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M1B72_10620
Lipid biosynthesis proteins [BR:
gpl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M1B72_10620
Exosome [BR:
gpl04147
]
Exosomal proteins
Exosomal proteins of breast milk
M1B72_10620
Exosomal proteins of breast cancer cells
M1B72_10620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UPU38136
LinkDB
All DBs
Position
2486605..2489085
Genome browser
AA seq
826 aa
AA seq
DB search
MRTLVDLFHSFAPRGDKTALVNRTGVRRFAVSYGELSVLSLKMAALLARHGVEPGDRVLL
WGPNSSWWGVAYWGIIMRGAIAVPVDFMSDRGRAESILKLTQAKVVLQSRFKPERLQVEN
SLLLEDLKYLLEEVAPYPDVVHPAPDDIAQLIYTSGTTGNPKGVILTHKNLVANILQINR
QVPIITPEFSFLSLLPLSHMFEQMGGFFTPLYRGGAVIYPRTLKPSAIMEALGEEDVYVI
MSVPRLMQLLKTTIERELAEKHLTGVFAALARIGAGLSKPARKKLFFPVQRKFGAHFTVF
VSGGAPLDPDVFRFWDSMGFTVLEGYGLSECSPVLCVNTIDKQVAGSVGPPLPGVELRLD
GKEVVVRGDNVFPGYYQNEAATRDAFTADGWFKTGDLGEIGPDGWLTIKGREKELIVTGG
GVNVYPDELEAVLNKVPGVKESCVIGLDRGAGEEVHAVLLLDDSGAKPDEILARANAQLD
TMHQITGCTIWREPEFPKTTTLKIKKFQVKEQVKQGAAAGGAGTTQDHLVNLLAKVTGAD
PAEIKEESLLVADLGLTSIGRLELVNYLEQEFRLDIEDSQIGPQTRVAEVRRIIARREKG
HRRGHYRFWTNSAPVRALRMLGDALLNYPLYRLFVKLEVRGRENVEHLDGPVIFIGNHLG
YFDQPSLMFALPREVRYRTATAAWEEFFFGDYHGLDRFLRLAAYQYGTLFLNLFPLPQTS
GFSTAVKYMGKLTDRGLNTLIFPEGGHSHDGAMQDFQLGLGIIAKELEIPIVPVKIVGTD
KILPPKHTGLPNRGTVTVSFGKPLRFRFEEPAEIVARAQAAVAEIQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcggacactggtagatctattccatagtttcgcgccgcggggcgacaagaccgccttg
gtgaatcgcaccggcgtgcgccgtttcgctgtctcgtatggcgagctttcggtactgtcc
ctgaaaatggcggccctgctggcgcgacacggcgtcgagcccggcgaccgcgtcctcttg
tggggtcccaactcgtcctggtggggcgttgcctactggggcatcatcatgcgcggcgcc
atcgccgttccggtcgacttcatgtccgaccgcggccgcgccgaatcgatcctgaagctg
acccaggccaaggtggtgctgcaaagccgcttcaagccggagcggctccaggtggaaaac
tccctgctgctcgaggacctgaagtacctgctggaggaggtagcaccgtacccggacgtg
gtgcatcccgcgccggacgacatcgcgcagctcatctacacctcgggaaccaccggcaac
cccaaaggggtgatcctgacccacaagaacctggtggccaacatcctgcagatcaaccgg
caggtgcccatcatcaccccggagttttcctttctctcgctgctgccgctgtcgcacatg
ttcgagcagatgggtggcttcttcacgccgctgtaccgcggcggcgccgtcatctacccg
cgcacgctcaagccttccgccatcatggaggccctcggcgaggaagacgtctacgtcatc
atgtccgtgccgcgcctgatgcagcttttgaagaccaccatcgagcgcgagttggccgag
aagcatctcaccggggtttttgccgcgctggccaggatcggggcggggctctccaagccg
gcgcgcaagaagctcttcttcccggtgcagaggaaattcggcgcccactttaccgtcttc
gtctcgggcggggctccgctcgacccggacgtgttccgcttctgggacagcatgggcttc
accgtgctggaggggtacgggctttccgagtgctcgccggtcctctgcgtcaacaccatc
gacaagcaggtggcgggctcggtggggccgccgcttccgggcgtcgagctcaggctggac
ggcaaggaggtggtggtgcggggcgacaacgtcttcccggggtactaccagaacgaggcg
gcgacccgggacgccttcaccgccgacggctggttcaagaccggcgacctgggcgagatc
gggccggatggctggctcaccatcaaggggcgcgagaaggagctgatcgtcaccggcggc
ggggtcaacgtctacccggacgaactggaagcggtgctgaacaaggttcccggcgtcaag
gaatcctgcgtcatcggcctggaccgcggggcaggggaggaggtgcacgcggtcctcttg
ctggacgatagcggcgccaagccggacgagatcctggcccgggccaacgcccagttggac
accatgcaccagatcaccggctgcaccatctggcgcgaacccgagttcccgaagaccacc
acgctcaagatcaagaagttccaggtcaaggagcaggtgaaacaaggcgccgccgcggga
ggcgccggtaccacccaggaccacctggttaatcttctggccaaggtgaccggtgccgac
ccggctgaaatcaaagaggaatccctgctggtcgccgacctcgggctcacctcgatcggg
cggctggaactggtcaactacctggagcaggagttccgtctcgacatcgaggactcccag
atcgggccccagaccagggtcgccgaggtgcgccgcatcatcgcccggcgcgaaaagggg
caccggcgcggccactaccgcttctggaccaactcggccccggtgcgcgcgctgcgcatg
ctgggcgacgcgctcctgaactaccccctgtaccggctcttcgtgaagctcgaggtgcgc
gggcgcgagaacgtcgaacaccttgacgggccggtgatcttcatcggcaaccacctgggg
tacttcgaccagccctcgctgatgttcgcgctccccagggaggtccgctaccgcacggcg
accgcggcctgggaggaattcttcttcggcgactaccacggcctggaccgtttcctgcgc
ctggcagcctaccagtacgggaccctgttcctgaacctgttcccgctgccgcagaccagc
ggcttctccactgccgtcaagtacatggggaaactgaccgaccgcgggctcaacaccctc
atcttcccggagggggggcattcgcacgacggcgccatgcaggacttccagctcggcctg
ggcatcatcgccaaggagctggagattcccatcgtgccggtgaagatcgtggggaccgac
aagatcctcccgcctaaacataccggccttcccaaccggggcacggtgacggtcagcttc
ggcaaaccgctccgcttccggttcgaggaaccggccgagatcgtggcgcgggcgcaggcc
gcggtggctgaaattcaatga
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