Geomonas paludis: M1B72_11085
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Entry
M1B72_11085 CDS
T08160
Name
(GenBank) PAS domain S-box protein
Organism
gpl
Geomonas paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
HATPase_c
PAS_8
dCache_1
Response_reg
PAS_3
PAS_7
HisKA
Cache_3-Cache_2
HAMP
dCache_2
Diguanyl_cycl_sensor
HPTransfase
sCache_2
PAS_GdpP
MCP-like_PDC_1
Nif11
Motif
Other DBs
NCBI-ProteinID:
UPU38227
LinkDB
All DBs
Position
complement(2603526..2607314)
Genome browser
AA seq
1262 aa
AA seq
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MRTFSLKTKMTVTISLLIAGLLSILALTTHLYVTDQIKGLLFTQQFDMVTALADQIDDKL
RLSQTELAATAHTLKTATLQDPRTLQSFFDQRPGNLSMFDNGLFLFSAQGALISGNPLDS
GIIGKNFLFRDYLKKTLATRQPQISAPFLSSQTHRHPIIMLTAPILDDRGEVAGVLAGSI
DLTKDNFVTRVGRITLGDKGYLYLYNTDRVMIAHPDSRRVFKQDVPVGKNRLYDEAIAGY
EGTGETVNSRGLAVISSFKRLKTTNWILASNFPQQEAYAPIYRARSYILIALFVVFLISM
LVVSLCMKFLTAPLTTFTEQIRVLAQNKDGDVAPLSIATGDEIGVLGDAFNQLLQELQQQ
KYELKRQLEFSQKLIEVTPIPVFYKGADGRYLGCNQAFSNFTGFTRDRVIGRTVFDLTPA
ALAEVHHRSDQEIIAGAGVQVYESKTMHADQAERDVIFFKTSFTTTSGSCGGILGVMLDI
TERKQAEAALQSQKEFAESLVLNMTQPTFVLDCQHRVIMWNHALENLTGIKAADVLGSAH
AGKVFYGIDRPVLADLVLDENFDEGVRFYSDCRRSPLIEGGLQAEGWYQDPDGKGHYVTI
NAAQIRDRQGRVVGAIQNLEDITERKQAEVAHEQTRRQMQLILDAAGEGINGVDMQGRIT
FVNPAAAHMVGWTQEELLGQHQHSLMHHTREDGSPFPEQECPMSAACYEGRPYQGSDELF
WRKDGSSFYAEYNCRPLREGGELVGAVVIYKDVTERRQADEQLLKLSQAVMQSPVAIMIT
DIRGDIEFVNPRFTEITGYSSEEVIGKNPSILKSGKTSPELYQGMWDTITAGRVWTGELY
NRHKNGSTFWQHSTISPILNSSGVISHFMAFMESINERKKLEEQLRQAQKMEAIGQLAGG
VAHDFNNILTVILGFGQLLQHSLPKDDPMLEHMEQILDAADRATHLTKSLLAFSRKQVMV
MQQVELNELTRRHAKFLVRIIGEDVTLKTAFSDEKLLVMADSGQLEQVLMNLATNARDAM
PSGGELTIRTEVTTLDKEFHRQYGYGMPGRYALITVGDTGTGMDAETQQKIFEPFFTTKL
PGRGTGLGMSIVYGIIKQHGGYITVFSQVGFGTTFSIYLPLITEKVQSGEKPATFIPEGG
SESILVVEDDAAVGRLVESVLKRYGYQVILANSGDEALELFPSRGQEISLALLDVIMPKM
NGKQLCEELRRHSPKLKVLFLSGYTADVIQDKGIFMEEGVDIIKKPARPIELAKKVREML
DS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcacctttagcctgaaaaccaagatgacggtaaccatatccctgttgattgcgggg
ttgctgtcaattcttgcgctcaccacccacctgtacgtcaccgaccagatcaagggactg
cttttcacgcagcagttcgacatggtcaccgcccttgccgaccagatcgacgacaagctc
cgcctgtcgcagacggaactggcagccaccgcccacaccctcaagaccgccacgctccag
gacccgcgcaccctgcagagcttcttcgaccagcgcccgggcaacctgtccatgttcgac
aacggcctgtttctcttttcggcccagggagcgctcatctccggcaatccgctcgacagc
ggcatcatcggcaagaacttcctgtttcgcgattacctgaaaaagaccctcgccacccgg
caaccccagatttccgcccccttcctctcgtcccagacgcaccggcaccccatcatcatg
ctcaccgcgccgatactggacgacaggggagaagtggctggcgtgctggcagggagcatc
gacctcaccaaggacaatttcgtgacccgggtaggcaggatcaccctcggagacaagggg
tatctctacctgtacaacacggaccgggtgatgatcgcccaccccgacagccgccgggtc
ttcaagcaggacgtcccggtcggcaagaaccgcctctacgacgaggccatcgcggggtac
gaggggaccggcgagaccgtcaactcccgggggctggcggtcatcagttccttcaaacgg
ctcaaaaccaccaactggatcctcgccagcaacttcccgcagcaggaggcctatgcgccg
atctaccgcgcccgcagctacattctgatcgcgctgtttgtggtgtttctcatctccatg
ctggtggtctcactgtgcatgaagttcctgaccgcaccgcttaccaccttcaccgagcag
atcagggtactggcccagaacaaggacggtgacgtcgccccgctcagcatcgcgacgggc
gacgagatcggcgtgttgggggatgccttcaaccagttgctgcaggagttgcagcagcag
aaatacgagttgaagcggcaactggagtttagccagaagctgatcgaggtcacccccatt
cccgtcttctacaagggggccgacggccgatacctggggtgcaaccaggccttttccaac
ttcaccggcttcaccagggaccgcgtcatcggcaggaccgtcttcgacctgacccccgcg
gcactggccgaagtgcaccaccgctccgaccaggaaatcatcgccggcgccggggtgcag
gtctacgaaagcaaaaccatgcatgccgaccaggccgagcgggacgtcatcttcttcaag
accagtttcacgaccacgagcggcagctgcggcgggatcctcggggtcatgctcgacatc
accgaacgcaagcaggccgaggccgccctgcagtcgcagaaggaattcgccgagagcctg
gtcctgaacatgacccagcccaccttcgtgctggactgccagcaccgcgtcatcatgtgg
aaccatgccctggagaacctcaccgggatcaaggccgccgacgtcctcggttccgcccat
gccggcaaggtcttttacggcatcgacaggccggtgctcgccgacctggtactggacgag
aacttcgacgagggggtcaggttttacagcgactgccgcaggtcgcccctgatcgagggg
gggctgcaggccgaagggtggtaccaggaccctgacggcaagggccattacgtcaccatc
aacgccgcgcagatccgcgaccggcaggggagggtggtcggcgccatccagaacctggag
gacatcaccgagcgcaagcaggccgaggtcgcacacgaacagacgcggcgccagatgcag
ctcatcctcgatgccgcgggagaggggatcaacggcgtcgacatgcagggacgcatcacc
ttcgtcaacccggcggcggcgcacatggtgggatggacccaggaagaactgctcgggcag
catcagcattccctgatgcaccacacccgtgaagacgggtccccgttcccggagcaggag
tgccccatgtcggccgcctgctacgagggacgcccataccagggaagcgacgagctgttc
tggcgcaaggacggcagcagcttctacgccgagtacaactgcagacccctgcgggaaggg
ggagaactggtcggcgccgtggtcatctacaaggacgtcaccgagcggaggcaggccgac
gaacagttgctgaagctgtcccaggccgtgatgcagagcccggtggccatcatgatcacg
gacatcagaggcgacatagagttcgtcaatccgcgctttaccgagattaccggctacagc
tcggaagaagtcatcggaaaaaaccctagcatcctgaagagcggcaagacctcgcccgaa
ctgtatcaggggatgtgggacaccatcaccgcgggtcgcgtctggaccggcgagttgtac
aaccggcacaagaacggctccaccttctggcagcactccaccatctccccgatcctcaac
agctccggcgtgatcagccacttcatggccttcatggagagcatcaacgagcgcaagaaa
ctcgaggagcaactgaggcaggcccagaaaatggaggccatcggccagctcgccggcggg
gttgcccacgatttcaacaacatactcaccgtcatcctcgggttcggacaactgttgcag
cactccctgcccaaagacgacccgatgctggagcacatggagcagatcctcgacgcagcg
gaccgggccacccacctcaccaagagcctgttggccttcagccgcaagcaggtgatggtg
atgcagcaggtggaactgaacgaactcacccgcaggcacgccaagttcctggtgcgcatc
atcggcgaagacgtgacactgaagaccgcgttcagtgacgagaagctgctggtaatggcc
gacagcggccagttggagcaggtgctgatgaacctcgccaccaacgccagggatgccatg
cccagcggaggcgagctcaccatcaggaccgaggtgaccaccctggacaaagagttccac
cgccagtacgggtacggcatgcccgggcgctacgccctcatcaccgtcggcgatacgggg
accggtatggatgccgaaacgcagcagaagatcttcgaacccttcttcaccaccaagctc
cccgggcgcggcaccgggctcggcatgtcgatcgtgtacggcatcatcaagcagcacggc
ggctacatcaccgtcttcagccaggtcggcttcggcaccaccttcagcatctatctgccg
ctgatcacggaaaaggtgcagtcgggcgagaaaccggcgaccttcatccccgaagggggg
agcgagagcatcctggtcgtggaggacgacgccgccgtcggacgattggtcgagtcggtc
ctgaagagatatggataccaggtgatactggcgaacagcggcgacgaggcgctggaactg
ttcccgtcaagaggtcaggagatcagcctggcgctgcttgacgtgatcatgcccaagatg
aacgggaagcaactctgcgaggagttgcgccggcactcaccgaagttgaaagtgctcttc
ctgagcggctacaccgccgacgtgatacaggacaaggggatcttcatggaggagggggtc
gacatcatcaagaagccggcccggcctatcgaactggccaagaaggtccgtgagatgctc
gattcctga
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