Geomonas paludis: M1B72_11680
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Entry
M1B72_11680 CDS
T08160
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gpl
Geomonas paludis
Pathway
gpl03030
DNA replication
gpl03430
Mismatch repair
gpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M1B72_11680
03430 Mismatch repair
M1B72_11680
03440 Homologous recombination
M1B72_11680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpl03032
]
M1B72_11680
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_11680
Enzymes [BR:
gpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M1B72_11680
DNA replication proteins [BR:
gpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M1B72_11680
DNA repair and recombination proteins [BR:
gpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M1B72_11680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UPU34115
UniProt:
A0ABY4L803
LinkDB
All DBs
Position
complement(2763327..2764262)
Genome browser
AA seq
311 aa
AA seq
DB search
MAVKQKGGPMNALEIEIAIAALHNTGDYQVLRRLNLARDARLGCKGPEHAKVALCLDTET
TGLNHKQDKVIELGIVAFEFDPVTGEIFRITDRYSGFEDPGFAIPPEVQEITGISDDMVR
GQAFDDAFVNALAEKSDLVIAHNAAFDRKFVETRFPSFVKLPWACTVCQIDWGAERLSSR
TLEFLLFKTGSLTINAHRALDDAEGVLGLLLERLPVSGAPIFLELLKRAHEVTSRIYAVS
APFDKKDVLKERGYRWSDGTQGGSKAWWRDVPAHEEPEELAYLAREIYPRGNTSAVQIMR
CDAYARFSVRE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagcaaaaagggggcccgatgaacgcgctggagatagaaatcgccatcgcg
gccctgcacaacacgggggattaccaggtgctgcggcgcctgaacctggcgcgcgacgcg
aggctcgggtgcaaggggcccgagcacgccaaggtcgcgctttgcctcgacaccgagacc
accgggctcaaccacaagcaggacaaggtgatcgagctgggcatcgtcgccttcgagttc
gatccggtcactggcgagatctttcgcatcaccgaccgctattccggcttcgaggatccc
ggcttcgccattcctcccgaggtgcaggagataaccggcatctccgatgacatggtacgc
ggtcaggccttcgacgacgccttcgtcaatgccctggcggagaaatccgacctggtcatc
gcgcacaatgccgccttcgaccgcaagttcgtcgagacgcgctttccctctttcgtcaag
ctcccctgggcctgcaccgtctgccagatcgattggggcgcggagcggctctcctcgcgc
accctcgaattcctcctgttcaagaccggctccctcaccatcaacgcgcaccgcgccttg
gacgacgccgagggggtgctggggctgttgctggagcgtttgccggtgagcggcgcgccg
attttcctggagcttctgaagcgggcgcacgaggtcacctcgcgcatctatgcggtgtcg
gcgcccttcgacaagaaggatgtactcaaggagcgggggtatcgctggagcgacgggacg
cagggggggagcaaggcgtggtggcgcgatgtgccggcgcacgaggaaccggaagaactg
gcctatcttgcgcgcgagatctacccccgcggcaacaccagcgccgtgcagatcatgcgc
tgcgacgcctacgccaggttttcggtgcgggagtaa
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