Geomonas paludis: M1B72_12085
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Entry
M1B72_12085 CDS
T08160
Name
(GenBank) TrpB-like pyridoxal phosphate-dependent enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
gpl
Geomonas paludis
Pathway
gpl00260
Glycine, serine and threonine metabolism
gpl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01230
Biosynthesis of amino acids
Module
gpl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M1B72_12085
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
M1B72_12085
Enzymes [BR:
gpl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
M1B72_12085
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
UPU34189
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Position
complement(2853683..2855038)
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AA seq
451 aa
AA seq
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MNTKFLLDESRIPKQWYNIIPDMPGPLEPVINPATLKPVTPEDMTPIFPMSLIEQEMSNQ
RWIDIPEEVREKYRIWRPSPLFRARRLEQALQTPAKIYYKYEGVSPAGSHKPNSAIPQAW
YNKQAGIRRLATETGAGQWGSSLALACSMFGLECTIYMVKVSCTQKPYRKSMMQLWGATV
IPSPSEFTNAGRGILAHDPDNLGSLGIAISEAVEDAATHDDTNYALGSVLNHVCLHQTVI
GLEAKEQMALAQDYPDVVIACCGGGSNFAGLTFPFLMDRANGKKVRCLAVEPASCPTLTK
GVYAFDYGDTAKLAPITKMYTLGHDFMPPGIHAGGLRYHGESALISQLYHAGEIEAKSYK
QNACFEGALLFARTEGIVPAPESSHALRAAIDEAVLAKEEGKEKTILFGLSGHGQLDMGA
YDAYLSGRLEDYEYPEESIRQSLERLPKVSL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaagttcctgcttgacgagtcccgcatcccgaaacagtggtacaacatcatt
cccgacatgccggggccgctggagccggtgatcaacccggcgacgcttaagccggtcacc
ccggaggacatgaccccgatcttcccgatgtctctcatcgagcaggagatgtccaaccag
cgctggatcgacatcccggaagaggtgcgcgagaagtaccggatctggcgcccgtcgccg
ctgttccgcgcgcgcaggctggagcaggcgctgcagacccctgcgaagatctactacaag
tacgagggcgtttccccggcgggctcccacaagcccaacagcgccatcccgcaggcgtgg
tacaacaagcaggccggtatccgcaggctggccaccgagaccggcgccgggcagtggggg
agctccctggccctggcctgctccatgttcggcctggagtgcaccatctacatggtgaag
gtttcctgcacgcagaaaccgtacagaaagagcatgatgcagctttggggcgccaccgtg
atcccgtccccgtccgagttcaccaatgccgggcgcggcatcctggcgcacgacccggac
aacctggggagcctgggcatcgccatttccgaggcggtggaggacgccgccacccacgac
gataccaactacgcgttggggagcgtgctgaaccacgtctgcctgcaccagaccgtgatc
ggcctggaggccaaggagcagatggcgctggcccaagactacccggacgtggtcatcgcc
tgctgcggcggcggttccaacttcgcgggactcaccttcccgttcctgatggaccgcgcc
aacggcaagaaggtgcgctgcctggccgtcgagcccgcctcctgtccgaccctcaccaag
ggggtctacgccttcgactacggcgacaccgcgaagcttgcgcccatcaccaagatgtac
accctggggcacgacttcatgccgccggggatccacgccggcggcctgcgctaccacggc
gagtccgcgctcatctcgcagctctaccatgccggtgagatcgaggccaagtcctacaag
cagaacgcctgcttcgagggcgcgctcctcttcgccaggaccgaggggatcgtccccgcg
ccggaatcctcccacgccttgcgcgccgccatcgacgaggccgtgcttgccaaggaagag
gggaaggagaagaccattctcttcgggctttccggtcacggccagctcgacatgggcgcc
tacgatgcctatctctccggccggctcgaagactacgagtatccggaggaatcgatccgt
caatcactggagcggctccccaaggtgagcctgtaa
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