Geomonas paludis: M1B72_12835
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Entry
M1B72_12835 CDS
T08160
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gpl02022
]
M1B72_12835
Two-component system [BR:
gpl02022
]
NtrC family
Unclassified
M1B72_12835
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_16
AAA_2
AAA
DZR_2
HTH_17
AAA_22
zf-ribbon_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UPU34336
LinkDB
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Position
complement(3029873..3031342)
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AA seq
489 aa
AA seq
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MGRLDVRVRTHLDSTVCYIAREDRPEEQVTVTELSLSGALVVGLSTQLSEIFAIKPVIPG
KGEVELLAKLVRQGQGGAAVRLFYSDHDTMQALWEHVRDSLPQTDSCPYCGHPDDSREGS
CDKCNLYLNFAKNNYLERHIENTFAQRLNIRLSRLNLEHIQKIIQFVDSKLLKIQHRSPD
KEFVGTSEGMLSVFSMIRKVAPTEMSVLLLGESGTGKELTARSLHQLSTRRDGPFVAVNC
AAIPETLLEAELFGYEKGAFTGAYATKKGKFESADGGTLFLDEIGDLPASLQAKLLRFLE
DRLVQPVGSAHSKKIDVRIVAATNCDLQRAIGQGHFRTDLFYRLNSFTIKLPPLRERGED
KVRLARYFLDKFSCSENRSMQFSEEALDAIRSHAWPGNVRELENKVRRGFLMATGRVIDP
ECMELDQDGIPAPVPEPVSRPGSSQKEYVIQVLEQNDYVIARAARQLNISRPSMYALIKK
HGISRDDMK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggtagacttgatgtcagagtccgcacgcatcttgactccactgtttgctacatcgca
cgggaagacaggccggaagagcaggtgaccgtcacggaactcagcctgagcggcgccctg
gtggtcggcctttccacacagctgagcgaaattttcgccattaagccggtcattcccggc
aagggcgaggtggagctcttggccaagctggtgcggcaggggcagggaggtgccgcagtc
cgtctgttctactccgaccacgacaccatgcaggccctgtgggaacacgtcagggacagc
cttccccagaccgattcctgtccctactgcggccaccccgacgactcccgcgaagggtcc
tgcgacaagtgcaacctctacctcaactttgccaaaaacaactacctcgaacggcacatc
gaaaacaccttcgcccagcgcctcaacatccgtctcagccggctcaacctcgagcacatc
cagaagatcatccagttcgtagactccaaattgctgaagatccagcaccgctccccggac
aaggagttcgtcggcacctcggaggggatgctctccgtgttctccatgatcaggaaggtg
gctcccaccgaaatgagcgtgctccttctgggggagagcgggaccggcaaggaactgacc
gcgaggtccctgcaccagctctctacgcgcagggacggccccttcgtcgccgtcaactgc
gccgccattcccgaaaccctgctcgaggccgaactgttcgggtacgaaaagggggcgttc
accggggcctacgccaccaagaagggtaaattcgagtcagccgacggcggcaccctgttt
ctggacgagatcggagacctccccgccagcctgcaggcgaaactgttgcgctttctcgag
gacaggctggtccagccggttggttccgcgcactccaaaaagatcgacgtgaggatcgtg
gccgccaccaactgcgatctgcaacgtgccatcggccagggacatttccgcaccgacctc
ttctaccggctcaactccttcaccatcaagctcccccccctgcgcgagcggggagaggac
aaggtgcggctggcccggtacttcctggataaattctcctgcagcgaaaaccgctccatg
caattttccgaggaggccctggacgccatccgcagccacgcctggcccggcaacgtccgt
gaactggagaacaaggtgaggaggggattcctgatggccacggggagggtgatcgaccct
gagtgcatggagctggaccaggacggcatccccgcaccggtgcccgagccggtctccagg
ccggggtcatcccagaaggagtacgtcatccaggtgctggagcaaaacgattacgtcatc
gcccgggctgcccgccagttgaacatcagccgtcccagcatgtacgccctgatcaagaaa
cacggaatcagcagggacgacatgaaataa
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