Geomonas paludis: M1B72_13150
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Entry
M1B72_13150 CDS
T08160
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
gpl
Geomonas paludis
Pathway
gpl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M1B72_13150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gpl02022
]
M1B72_13150
02035 Bacterial motility proteins [BR:
gpl02035
]
M1B72_13150
Two-component system [BR:
gpl02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
M1B72_13150
Bacterial motility proteins [BR:
gpl02035
]
Pilus system
Twitching motility proteins
M1B72_13150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
bpMoxR
Mg_chelatase
AAA_2
AAA_7
IstB_IS21
DUF815
MCM
AAA_22
FleQ
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPU34397
LinkDB
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Position
complement(3109522..3110898)
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AA seq
458 aa
AA seq
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MAARILVVDDELSMREFLGILLDGEGHRVDQADSAETALACLGQQHYDMVISDVSMPGLS
GIDLLSRIKAQAPDTAVLLITAFTTAEQAVEAMKLGAYDYIGKPFKVEEVKVLVRKALEK
QSLVQENKRLKAEVQERFSFSGLIGKSKQMREVYELIEKVADSMANVLITGESGTGKELA
ARAIHYNSPRRNASFLAVNCGAIPETLIESELFGHTRGSFTGAIADRSGLFEQAEGGTLF
LDEIGEVPLQLQAKLLRVLQEREFRRVGGGTSLKADVRIVAASNRNLEEQVREGSFREDL
FYRLNVVQIRMPSLRERADDIPALVEHFYKKYSLWSGSGDIITPEALRALFNYPFPGNVR
ELENLVERCVVLGSRVIVLDCLPPSVRDHRVTAAPAGELEIPEEGIDLQAYLDTLEQKLL
VQALDKSGGVKKRAAALLGMTFRSFRYRLAKFGMDEAD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagaattttggttgtcgatgacgaactgagcatgcgggagttcctgggcatc
ctcctcgacggcgaggggcaccgggtggaccaggccgacagcgccgagaccgcccttgcc
tgcctgggacagcagcactacgacatggtgatctccgacgtcagcatgcccgggctgagc
ggcatcgacctgctctcccggatcaaggcgcaggcccccgacaccgcggtgttgctgata
accgccttcaccaccgccgagcaggcggtcgaggccatgaaactgggcgcctacgactac
atcggcaagcccttcaaggtggaagaggtgaaggtgctggtgcgtaaggcgctcgagaag
cagagcctggtgcaggaaaacaagcgactcaaggccgaggtgcaggagcgcttcagcttc
agcggcctgatcggcaaaagcaagcagatgcgcgaggtctacgagctgatcgagaaggtc
gccgacagcatggccaacgtgctcatcaccggggaaagcggcaccggcaaggaactggcc
gcccgggccattcattacaactccccgcgcaggaacgcctccttcctcgcggtgaactgc
ggcgccatccccgagaccctcatcgagagcgaactcttcggtcacaccaggggctccttc
accggcgccatcgccgaccgttccggcctcttcgagcaggccgaaggcggcaccctgttc
ctcgacgagatcggcgaggtgcccctgcaactgcaggccaagctcttgcgggtgctgcag
gagcgcgagttccgcagggtggggggagggacttccctcaaggccgacgtgcgcatcgtg
gccgcctccaaccgcaacctcgaggagcaggtgcgcgaggggtccttccgcgaggacctg
ttctaccgcctcaacgtggtgcagatccgcatgccgtcgctcagggagcgcgccgacgac
atcccggcgctggtcgagcacttttacaagaagtactcgctctggtccggctccggcgac
atcatcacccccgaagccctgcgcgcgctgttcaactaccccttcccgggcaacgtgagg
gaactcgagaacctggtggagcgctgcgtcgtgctggggagccgggtgatcgtgctcgac
tgcctccctccctcggtgcgcgaccatcgcgtcaccgcggcccccgcgggggaactggag
atcccggaggaggggatcgacctgcaggcgtacctggacaccctggaacagaagctcctg
gtgcaggccctggacaagagcggcggggtcaagaagcgggcggcggcgctcctggggatg
accttccgttccttccgctaccgtctggccaaattcggcatggacgaggctgactga
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