Geomonas paludis: M1B72_14180
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Entry
M1B72_14180 CDS
T08160
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
gpl
Geomonas paludis
Pathway
gpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
M1B72_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_14180
DNA repair and recombination proteins [BR:
gpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
M1B72_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
DivIVA
YkyA
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UPU34592
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Position
3336511..3338856
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AA seq
781 aa
AA seq
DB search
MINKDTLKRLEFDKILETAATFAHCEASHEGALAIAPLPTRQEMELRLGLVDEIRKLTRL
GIALKLAPFEDITPQVRAVRPKGAVIAPIALQRFIPTLRVMAAVASQLSFRSDVPLLLAE
AGCITGFPDLLNPLEHTVNEEGEILDTASRLLADIRGRKKGLTTRIKKRLEEIVRERHTA
IFLQDDFITQRSGRWVIPVRMDSKGMVPGVVHDVSNSGETAFMEPLEIIGLANELENLVA
DERAEEIRIVRQICDWIREDAEAILQQFEALVELDILNCIATLSDRLRSETPVIADTPTI
LLKAARHPILTLMGKDVVPLDLELAADNRVMVVTGPNTGGKTIAIKNAGLLSVMALCGMP
VPALPGTVLPKVESILVDIGDEQSIEESLSTFSAHISKISSIIEHADRGALVLLDELGTG
TEPGQGAAIACAVLKELQNKGALVVATTHLTEIIGFVQREAGMVNAAMAFDRQKLAPLYR
LVVGEPGESHALEIASRYGLPERVVSFARGMIGTMEADFHALLRDLKEKREQLDRTLAEL
AEREETLAHAERNLVDRRDEAARLVQDAREKGLLEAQQVIAKARREVAAMIDEAKRDKAR
EAKEKLDQAAREVEAALDGLHPEENVDPDQVAAGDVLFVKPLNCDATILSVDRRAGRARV
RAGSMELDVALVSLLKPKGKEPKKVRKQRARQQEAEAAASEPASSINLLGMRVEEAIGAL
EPFLNHASLERMSEVRVVHGKGTGALMKGVRSYLTGHPLVAEFRTGERFEGGDGVTVVTL
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaaggacaccctgaagcggctggaattcgacaagattctggaaaccgccgca
accttcgcccactgcgaggcatcccacgagggagcccttgccatagcaccgctaccaacc
cgccaggagatggaactgcgcctggggctcgtcgacgagatccgcaagctgacccggctc
ggcatcgcgctgaagctcgctcccttcgaggacatcaccccgcaggtcagggcggtccgt
cccaagggcgcggtcatcgcccccattgccctgcagcgcttcatccccaccctgcgtgtc
atggccgcggtggcctcgcaactatccttccgcagcgacgtaccgctgctcctcgccgag
gccggctgcatcaccgggttcccggaccttttgaacccgctcgagcacaccgtgaacgag
gagggtgaaatcctcgacaccgcatcgcggcttttggcggacatccggggcaggaagaag
ggactgaccacccgcatcaagaaacggctcgaggagatcgtgcgcgagcggcacacggcg
atcttcctgcaggatgatttcatcacgcagcgctccgggcgctgggtgattcctgtgcgc
atggactccaaggggatggtccccggcgtggtgcacgacgtatccaactcgggcgagacc
gctttcatggagccgctggagatcattgggctcgccaacgaactggagaacctggtggcc
gacgagcgggccgaggagatccgcatcgtccggcagatctgcgactggatcagggaggac
gccgaggcgatcctgcagcagttcgaggcgctggtggaactggacatcctcaactgcatc
gccaccttgagtgaccgtctcaggagcgagacgccggtcatcgccgacaccccgaccatc
ctgctcaaggcggcacgccacccgatcctcaccctgatggggaaggacgtggtcccgctc
gacctggaactggccgcggacaaccgggtcatggtggtcaccggccccaacaccggcggc
aagaccatcgccatcaagaacgcgggacttctttcggtaatggccctgtgcggcatgccg
gtccccgccctccccggcacggtgctgcccaaggtcgagagcatcctggtggacatcggc
gacgagcagtcgatcgaggagagcctctccaccttctcggcccacatctccaagatctcc
agcatcatcgagcacgccgaccgcggcgcgctggtgcttttggacgagctcggcaccggc
accgaaccgggacagggcgccgccatcgcctgcgccgtgctcaaggagttgcagaacaaa
ggggcactggtggtggcgaccacgcatctcaccgagatcatcggcttcgtgcagcgcgaa
gcagggatggtgaacgcggccatggccttcgaccggcagaagctggcgccgctgtaccgg
ctggtggttggcgagccgggcgagagccacgccctcgagatagccagccgctacggcctc
cccgagcgggtggtcagcttcgcccggggcatgatcggcaccatggaggcggacttccat
gccctgttgcgcgacctgaaggagaagcgcgagcagttggaccgcaccctggccgaactg
gccgagcgcgaggagacgctggcgcacgcggagcgcaacctggtggaccgccgcgacgag
gcggcccggctggtgcaggatgcccgcgagaaggggctcctggaggcgcagcaggttatc
gccaaggcccggcgcgaggtggcggccatgatcgacgaggccaagcgcgacaaggcgcgc
gaggccaaggaaaagctggaccaggcggcacgcgaagtcgaagcggcgctggacgggctg
catcccgaggagaacgtcgacccggaccaggtcgcggccggggacgtcctcttcgtgaag
ccgctcaactgcgacgccaccatcctctccgtggatcgtcgtgccgggcgcgcccgcgtg
cgtgccgggagcatggagttggacgtcgcactggtatcgctgttaaagcccaaggggaaa
gagccgaagaaggtacgtaagcagcgcgcccggcagcaggaggccgaggccgccgcctcc
gagcccgcgagcagcatcaacctgctcgggatgcgggtcgaggaagccatcggcgcgttg
gagcccttcctgaaccacgcctcgctggagcggatgtccgaggtgcgcgtggtgcacggc
aaagggaccggcgccctgatgaagggggtgcgcagctacctgaccggacacccgctggtg
gcggagttccgcaccggcgagcgtttcgaagggggcgacggtgtcacggtggtgacgctg
cgctag
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