Geomonas paludis: M1B72_16335
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Entry
M1B72_16335 CDS
T08160
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gpl
Geomonas paludis
Pathway
gpl00020
Citrate cycle (TCA cycle)
gpl00640
Propanoate metabolism
gpl00660
C5-Branched dibasic acid metabolism
gpl00720
Other carbon fixation pathways
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01120
Microbial metabolism in diverse environments
gpl01200
Carbon metabolism
Module
gpl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M1B72_16335 (sucD)
00640 Propanoate metabolism
M1B72_16335 (sucD)
00660 C5-Branched dibasic acid metabolism
M1B72_16335 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
M1B72_16335 (sucD)
Enzymes [BR:
gpl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
M1B72_16335 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UPU35006
LinkDB
All DBs
Position
complement(3845232..3846107)
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AA seq
291 aa
AA seq
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MSILIGKETKVITQGITGATGLFHAQGAREYGTQMVGGVTPGKGGTVIDGFPVWDTVAEA
VQATGATASVIYVPPPFAADSIMEAVDAGVELVCCITEGIPVLDMVKVKQYLVGKKTRLV
GPNCPGVITPGECKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTCIGLGQSTCVGIGG
DPVNGTSHIDCLRLFEEDPDTEAVIMIGEIGGSAEEEAARFVKENMTKPVAAYIAGVTAP
PGKRMGHAGAIISGGKGTATEKVAVLKECGISVAATPAEMAQALLKVYQPK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcatattgatcggcaaggagaccaaggtcatcacgcaggggatcaccggcgcgacc
ggtctgttccacgcgcagggcgcccgcgagtacggcacgcagatggtgggcggggtgacc
cccggcaagggggggacggtgatcgacggcttcccggtctgggacaccgtcgccgaggcg
gtgcaggcgaccggcgccaccgcgagcgtcatctacgtaccgccgccgtttgccgccgac
tccatcatggaggcggtggacgcgggggtggaactggtctgctgcatcaccgaggggatc
ccggtgctggacatggtcaaggtgaagcagtacctggtggggaagaagacccggctggtc
ggtcccaactgccccggcgtgatcacccccggcgagtgcaagatcggcatcatgcccggc
tacatccacaagcccgggaagatcggcgtcgtttcccgctccggcacgctcacctacgag
gcggtctggcagctgacctgcatcggcctcggccagtcgacctgcgtcggcatcggcggc
gacccggtcaacggcaccagccacatcgactgcctgcgcctgttcgaggaggacccggac
accgaggcggtgatcatgatcggcgagatcggcggcagcgccgaggaggaggcggcacgc
ttcgtcaaggagaacatgaccaagccggtggcggcctacatcgccggtgtcaccgctccc
ccgggcaagaggatggggcatgccggcgccatcatctccggcggcaaggggaccgcgaca
gagaaggtggcggtgctgaaggagtgcggcatcagcgtggcggcgaccccggccgagatg
gcccaggcgctgctcaaggtctaccagccgaaataa
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