KEGG   Geomonas paludis: M1B72_16615
Entry
M1B72_16615       CDS       T08160                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
gpl  Geomonas paludis
Pathway
gpl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gpl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M1B72_16615
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gpl02022]
    M1B72_16615
Two-component system [BR:gpl02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   M1B72_16615
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase bpMoxR AAA_3 AAA_16 ATPase TIP49 AAA_2 MCM nSTAND3 AAA_7 AAA_22 ENTR1
Other DBs
NCBI-ProteinID: UPU35060
UniProt: A0A6V8N211
LinkDB
Position
complement(3908494..3909867)
AA seq 457 aa
MTETILIVDDEEGIRSSLAGILEDEGYRTVCAADGTEALALCQKELPGLVLLDIWMPRMD
GIETLKRLKEQHPTLNVIMMSGHGTIETAVKSTKLGAYDFIEKPLSLEKVVVTVENALSM
NRLKEENAALRGQVQQGHEMIGQSAAMQQLAEQIRLVAPTNASVLITGENGTGKELVARS
VHYHSQRRDKPFIEINCAAIPEELIESELFGHERGAFTGAVAQKKGKFDLADGGTLFLDE
IGDMSLKTQAKVLRILQEKKFERVGGTRTLEVDVRIVAATNKLLEEEIKNGTFREDLYYR
LNVVPFKVPPLRDRREDIPLLAGYFLDAFCDQEGRERKRIVPEAMESLKRYDWPGNVREL
KNIVERLVIMTPGGTITMNHLPDDFVSPGGREEAGGKLDSVLELSSLREAREEFEREFIM
QKLEENDWNVSKTAEAIELERSNLHRKIKSYGIDMKK
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaccgagaccattctgatagtcgatgacgaggaggggatccgctcctccctggccggc
atcctcgaggacgaggggtaccgcaccgtgtgcgcggcggacgggaccgaggcgctcgcc
ctgtgccagaaggagcttcccggactcgtgctcctggacatctggatgccccggatggac
ggcatcgagacgctcaagcgcctgaaggagcagcacccgaccctcaacgtgatcatgatg
agcgggcacggcaccatcgagaccgcggtcaagtccaccaagctgggcgcctacgacttc
atcgagaagccgctttccctggagaaggtggtggtgaccgtggagaacgcgctctccatg
aaccgcctgaaggaggagaacgcggccctcagggggcaggtgcagcaggggcacgagatg
atcggccaatcggccgccatgcagcaactggccgagcagatccggctggtcgcccccacc
aacgcctcggtcctcatcaccggcgagaacggcaccggcaaggaactggtggcccgctcg
gtccactaccacagccagcgccgcgacaagcccttcatcgagatcaactgcgccgccatc
ccggaggagctgatcgagagcgaactgttcggccacgagcggggggccttcaccggcgcc
gtggcgcagaagaaggggaagttcgacctggccgacggcggcaccctgttcctggacgag
atcggcgacatgtcgctcaagacccaggccaaggtgctgcgcatcctgcaggagaagaag
ttcgaaagggtggggggaacccggaccctggaggtggacgtgcgcatcgtcgccgccacc
aacaagctcctcgaggaggagatcaagaacggcaccttccgcgaggacctctactaccgg
ctcaacgtggtccccttcaaggtcccgccgttgcgcgaccgccgcgaggacatcccgctt
ctggccggctacttcctggacgccttctgcgaccaggagggacgcgagcgcaagcggatc
gtcccggaggcgatggagtcgctcaagcgctacgactggcccggcaacgtgcgcgagttg
aagaacatcgtggagcgcctggtgatcatgacccccggcggcaccatcaccatgaaccat
ctccccgacgacttcgtctcgcccggcggccgggaagaggcgggggggaagctggacagc
gtgctggagctctccagcctcagggaggcgcgcgaggagttcgagcgcgagttcatcatg
caaaagctcgaggagaacgactggaacgtctccaagaccgccgaggcgatcgaactggag
cggagcaacctgcaccgtaagatcaagagctacggcatcgacatgaagaagtag

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