Geomonas paludis: M1B72_16825
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Entry
M1B72_16825 CDS
T08160
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
gpl
Geomonas paludis
Pathway
gpl00260
Glycine, serine and threonine metabolism
gpl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01230
Biosynthesis of amino acids
Module
gpl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M1B72_16825 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
M1B72_16825 (trpB)
Enzymes [BR:
gpl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
M1B72_16825 (trpB)
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
UPU35101
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All DBs
Position
complement(3953972..3955162)
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AA seq
396 aa
AA seq
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MDTPDNSGHFGRFGGRYVSETLMPALLELEQAYNHFRNEKGFQEEFAYYLRQYVGRPNPL
YFAEKLSRKMGGAKIYLKREDLNHTGAHKVNNTIGQALLAKRMGKNKVIAETGAGQHGVA
TATVAALFGMECEVFMGEEDIRRQSLNVFRMKLLGAKVNPVSSGTATLKDAMNEAMRQWV
TNVEDTFYIIGTVAGPHPYPVMVRDFQAIIGQEARAQHLEAEGRLPDYLIAAVGGGSNAI
GLFHPFVNDGSVQMIGVEAAGYGIDSGKHAAPLSAGSVGVLHGNKTYLLQDEFGQIAHAH
SISAGLDYPGVGPEHSYLKEIGRASYVSVTDDEALDAFQVLTREEGIIPALESSHAVAHA
LRLAPTLSTNESIVVCLSGRGDKDIHTVADVMGVQL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttggatacgcctgacaacagtggtcacttcggccgtttcggcggcagatacgtctcggaa
acgctcatgccggcgctgctcgaactcgagcaagcgtacaaccattttcgcaacgaaaag
gggttccaggaggagttcgcctactacctgcgccagtacgtcggccgccccaacccgctc
tatttcgccgagaaactgagccggaaaatggggggcgcgaagatctatctgaagcgcgag
gacctgaaccacaccggcgctcacaaggtgaacaacaccatcggccaggcgctgcttgcc
aagcggatgggcaagaacaaggtgatcgccgagaccggcgcgggccagcacggcgtggcg
accgcgaccgtcgcggcgctgttcggcatggagtgtgaggtgttcatgggcgaggaggac
atccggcgccagtccctgaacgtgttccgcatgaagcttctgggcgccaaggtcaacccg
gtcagttccggcaccgcgaccctgaaggacgccatgaacgaggcgatgcgccagtgggtg
accaatgttgaggacaccttctacatcatcggcaccgtcgccggcccccacccctacccg
gtcatggtgcgcgacttccaggccatcatcggccaggaggcgagggcgcagcacctggaa
gccgaggggaggctgcccgactacctgatcgccgccgtaggcggggggagcaacgccatc
gggctgttccaccccttcgtcaacgacgggtcggtgcagatgatcggcgtcgaggccgcc
ggttacggcatagacagcggcaagcacgccgcaccgctttccgccggcagtgtcggggtg
ctgcacggcaacaaaacgtacctcctgcaggacgagttcggtcagatcgcccatgcccat
tccatttcggccggactggactacccgggcgtcgggccggagcactcgtacctcaaggag
atcggacgggccagctacgtttccgtcaccgatgacgaggcgctggacgcgttccaggtg
ctgacccgcgaggagggaatcattcccgcactggagtcttcccacgcagtcgcccatgca
ctgcgtctggctccgacactttccaccaatgagagcatcgtcgtctgtctgtcgggcagg
ggcgataaggacatccacaccgtagccgatgttatgggggtgcagctttaa
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