Geomonas paludis: M1B72_17725
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Entry
M1B72_17725 CDS
T08160
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpl03400
]
M1B72_17725
DNA repair and recombination proteins [BR:
gpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
M1B72_17725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF4177
Motif
Other DBs
NCBI-ProteinID:
UPU38315
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All DBs
Position
complement(4155783..4156196)
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AA seq
137 aa
AA seq
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MSGIKGRNTSPELLVRKQLHALGFRYRIHCSHLPGKPDVVLPKHRVVIFIHGCFWHGHDC
HLFKSPSTNVEFWENKISRNRQRDAEVLADLEHKGWRVLTVWECSIKGKNKVGVPSVVRL
VAEWIVSKEMRGEISGT
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatcaagggacgcaatacctcaccggagctgcttgttcgcaagcagcttcac
gcccttgggtttaggtatcgcatccactgcagccatctgcccggcaagcccgatgtcgtc
ttgcccaaacatcgtgtggtgatttttatccacggttgcttttggcacgggcacgactgc
cacctgttcaaaagtccctccaccaatgtggagttctgggaaaacaagataagcaggaac
cgtcagagagatgccgaggtcttggctgacttggaacacaaggggtggcgtgtgctcacg
gtgtgggaatgctcgataaagggcaaaaataaggtgggggtgccgtctgttgtaaggttg
gtcgctgaatggattgtatccaaagagatgagaggcgagataagtgggacttga
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