Geomonas paludis: M1B72_18140
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Entry
M1B72_18140 CDS
T08160
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
gpl
Geomonas paludis
Pathway
gpl00010
Glycolysis / Gluconeogenesis
gpl00020
Citrate cycle (TCA cycle)
gpl00260
Glycine, serine and threonine metabolism
gpl00280
Valine, leucine and isoleucine degradation
gpl00310
Lysine degradation
gpl00380
Tryptophan metabolism
gpl00620
Pyruvate metabolism
gpl00630
Glyoxylate and dicarboxylate metabolism
gpl00640
Propanoate metabolism
gpl00670
One carbon pool by folate
gpl00785
Lipoic acid metabolism
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01120
Microbial metabolism in diverse environments
gpl01200
Carbon metabolism
gpl01210
2-Oxocarboxylic acid metabolism
gpl01240
Biosynthesis of cofactors
Module
gpl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gpl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
gpl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
M1B72_18140 (lpdA)
00020 Citrate cycle (TCA cycle)
M1B72_18140 (lpdA)
00620 Pyruvate metabolism
M1B72_18140 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
M1B72_18140 (lpdA)
00640 Propanoate metabolism
M1B72_18140 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M1B72_18140 (lpdA)
00280 Valine, leucine and isoleucine degradation
M1B72_18140 (lpdA)
00310 Lysine degradation
M1B72_18140 (lpdA)
00380 Tryptophan metabolism
M1B72_18140 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M1B72_18140 (lpdA)
00670 One carbon pool by folate
M1B72_18140 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpl04147
]
M1B72_18140 (lpdA)
Enzymes [BR:
gpl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
M1B72_18140 (lpdA)
Exosome [BR:
gpl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
M1B72_18140 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
DAO
GIDA
FAD_binding_2
NAD_binding_8
Thi4
FAD_binding_3
AlaDh_PNT_C
Amino_oxidase
3HCDH_N
VCIP135_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
UPU35343
LinkDB
All DBs
Position
complement(4246603..4248009)
Genome browser
AA seq
468 aa
AA seq
DB search
MSEETFDLIVIGAGPGGYVAAIRGAQLGMKVAVVEKRGSMGGVCLNEGCIPSKALLDSSE
LYHLAKDRFAAHGIEVQPPTLNLGQMMARKDDVVKKLTDGIAFLFKKNKIVSFLGTAALL
SPENGTHRVEVKGEETKVVSAKKVILATGSEAVQVPTMPFDGEFVVSAREALSFPSVPEH
LLVVGGGYIGLELGSVWLRLGAKVTVVELLPRLVAGSDGQVAEALLRSLKKQGMTFMLGA
KVAGVEKKDGKLVARVEAEGGMQEIACDKVLVAVGRRPLTAGLNLEGLGIAMDGSRIRVD
ADYATSVAGIYAIGDLIAGPMLAHKAMEEGAVCVERMHGEPSQVDYGCIPGVCYTWPEAA
SVGKTEEALKEEGIAYKTGKFSFIANGRAKCMDETEGFVKLLTEAEGGRLLGVHILGPRA
SDMIAEAVTVMAFGGSGEDIALTVHGHPTLSEVMKEAALDLDKRAIHG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaactttcgatctcatcgtcatcggcgccggccccggcggttacgtcgcc
gccatcaggggggcgcagctcggcatgaaggtggccgtcgtggaaaagcgcggctccatg
ggcggcgtctgcctgaacgaagggtgcatccccagcaaggcgctcctcgactccagcgaa
ctctatcacctggccaaggaccgcttcgccgcccacggcatcgaggtgcagccgccgacc
ctcaacctcggccagatgatggcccgcaaggacgacgtggtcaagaaactcaccgacggc
atcgccttcctcttcaagaagaacaagatcgtcagcttcctcggcaccgccgccctgctt
tctcccgaaaacggcacgcaccgggtcgaggtgaaaggcgaggagaccaaggtcgtcagc
gccaagaaggtgatcctcgccaccggcagcgaagcggtgcaggtcccgaccatgcccttc
gacggcgagttcgtggtcagcgcccgcgaggcgctctcgttcccctctgtcccggagcac
ctcctggtggtgggggggggctacatcggcctcgagctcggctcggtctggctgcgcctg
ggcgccaaggtcaccgtggtggaacttctccccaggctggtcgccggcagcgacgggcag
gtggccgaggcactgctgcgctccctgaagaagcaggggatgaccttcatgctgggcgcc
aaggtggccggtgtggaaaagaaggacggcaagctcgtggcgcgcgtcgaagccgagggg
gggatgcaggagatcgcctgcgacaaggtgctcgtggcggtgggacgcaggccgcttacg
gcaggcttgaacctcgagggtctgggtatcgcaatggacggcagccgtatccgtgtcgac
gccgactacgccaccagcgtcgccgggatctacgccatcggcgacctgatcgccggtccc
atgctggcgcacaaggcgatggaggagggggcggtctgtgtggagagaatgcatggcgag
ccgagccaggtcgattacggctgcatccccggtgtctgctacacctggcccgaggcggcc
tcggtgggcaagacggaggaggccctcaaggaagaggggatcgcctacaagaccggcaag
ttcagcttcatcgccaacggccgcgccaagtgcatggacgagaccgaagggttcgtcaag
ctgctcaccgaggcggaaggggggcggctgctcggcgtgcacatcctggggccgcgcgcc
tcggacatgatcgccgaggcggtcaccgtgatggccttcggcggcagcggcgaagacatc
gccctcaccgtgcacggccatcccaccctctccgaggtgatgaaggaggcggcgctcgac
ctggacaagcgcgcgatccacggctga
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