Geomonas paludis: M1B72_18335
Help
Entry
M1B72_18335 CDS
T08160
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
gpl
Geomonas paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
AAA
Mg_chelatase
AAA_19
AAA_16
AAA_30
AAA_3
MCM
nSTAND3
AAA_22
PDE8A_N
Myosin_head
TIP49
bpMoxR
Peripla_BP_4
FleQ
PIF1
Glycos_transf_N
DUF815
UBA_4
Motif
Other DBs
NCBI-ProteinID:
UPU35380
LinkDB
All DBs
Position
complement(4299462..4300868)
Genome browser
AA seq
468 aa
AA seq
DB search
MHILVVDDESVIRDGLARILEGDSFTVDAAKNGHAAIELLQQKQFDLIITDLKMPGMSGF
EVLNAVKILQPDTPVIMITGFATVETAVEAMKNGTVDYIVKPFTPEQILEKVHLALEQKK
TTVEDIVVKKEIDCHHGFDEFVGESREMQKVYRRIIQVAATDSTVLITGESGTGKEVAAR
AIHKHSSRRDQPFVAVDCTALAENLLESELFGHVKGSFTGAMQTKMGLLMVADGGTLFLD
EVSNISLSTQAKLLRVLQERQVTPIGGTQPVSFNIHLVAATNRSLKTMVAEGKFREDLFF
RLNIIPLELPPLRERKGDIPLLIRHFMNKFVEEVGKDVRGISPEAMHFLENYSYPGNVRE
LVNTIERAVVLCEGDVIQKENLELGEAAEVCSTGFDGFVPTSAEALKEMKRHIRDRSVEN
VEKAFVIQALKRNNWNISRAAEETGMLRPNFQTMLKRLGISVKDYFGR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcatattctagtggtcgatgatgagtctgttattagggatggcctggcacgaatcctc
gaaggagattccttcaccgtagatgccgcgaaaaacgggcacgctgccatagagcttttg
cagcagaaacagttcgacctgatcatcacagatctcaagatgccgggcatgagcggcttt
gaggtcttgaacgcggtcaagatcctgcagccggacaccccggtgatcatgatcaccggc
ttcgccacggtggagaccgccgtcgaggcgatgaagaacggcaccgtcgactacatcgtc
aagcccttcaccccggagcagatcctggagaaggtgcacctcgcgctggagcagaagaag
accacggtggaagatatcgtggtgaagaaggagatcgactgccaccacggcttcgacgag
ttcgtcggggaaagccgggagatgcagaaggtctaccgccgcatcatccaggtcgccgcc
accgacagcaccgtcctcatcaccggcgagagcggcaccggcaaggaagtcgccgcccgc
gccatccataagcacagttcccggcgcgaccagcccttcgtcgccgtcgactgcaccgcc
ctcgccgaaaaccttctggagagcgaacttttcggccacgtcaaaggctccttcaccggc
gccatgcagaccaagatggggctgttgatggtcgccgacggcgggacgctcttcctcgac
gaagtctccaacatcagcctctccacccaggccaagctcctgcgcgtgctgcaggagcgc
caggtcaccccgatcggcgggacacagccggtctccttcaacatccacctggtggcagcc
accaaccgcagcctgaagaccatggtggccgaggggaagttccgggaagacctctttttc
cgcctcaacatcatccccctggaactccccccgctgcgcgagcgcaagggggacatcccg
ctgttgatccggcacttcatgaacaagttcgtcgaggaggtcggcaaggacgtgcgcggc
atctcgcccgaggcgatgcatttcctggagaactactcctaccccggcaacgtccgcgaa
ctggtcaacaccatcgagcgggccgtggtcctgtgcgagggggacgtgatccagaaggaa
aacctggaactgggcgaagcggccgaggtctgcagcaccgggttcgacggcttcgtcccg
accagcgccgaggcgctcaaagagatgaagcgccacatccgcgaccgctcggtggagaac
gtcgagaaggcgttcgtgatccaggccttgaagcgcaataactggaacatctcccgcgcc
gccgaggagaccggcatgctgcgccccaacttccagaccatgttgaaacggctgggcatc
tccgttaaggactatttcggtcgataa
DBGET
integrated database retrieval system
