Geomonas paludis: M1B72_18855
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Entry
M1B72_18855 CDS
T08160
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gpl
Geomonas paludis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gpl03110
]
M1B72_18855 (clpB)
Chaperones and folding catalysts [BR:
gpl03110
]
Heat shock proteins
HSP100
M1B72_18855 (clpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
NBD_SMAX1
ATPase_2
IstB_IS21
TniB
AAA_7
AAA_18
T2SSE
Zeta_toxin
NACHT
AAA_25
AAA_23
CNOT1_TTP_bind
SKA2
Motif
Other DBs
NCBI-ProteinID:
UPU35479
UniProt:
A0A6V8MS87
LinkDB
All DBs
Position
4404586..4407177
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AA seq
863 aa
AA seq
DB search
MIRQEKMTVKTQEAIATAHENALAMSAPAIEAEHLLLALIDQDGGFVPDLIKKIGAPLPR
LRDSVEDVLKRLPKVTGGAQVGLSAALNRILDQAQKEADTMHDSFVSTEHLLLALVASKD
TPSGRLLSQNGVTRDGILAALKELRGGEAVNEQDPEQKYQALAKYCRDLTDLARQGKLDP
VIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVSGDVPETLKDKVIMA
LDMGALIAGAKYRGEFEERLKAVIKEVARSEGKIILFIDEMHTLVGAGAAEGAMDASNML
KPALARGELHCIGATTLNEYRKHIEKDAALERRFQQVYAGEPSVEETISILRGLKEKYEN
YHKIQIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIELDSKPTEIDEIDRRV
IQLQIEREAMLREHDPKALERLKKLEEELATLKAQSDELNSHWKRETNILAELGELKQRK
EDKAEEAKRAERDGLLARTAEIRYGEIPAIEKEIEDKRLTLEQIQKEGKMLPEEVDAEMV
AEVVAKWTGIPVNRMLETESEKLVRMEERLKSRVVGQDEALTLVANAVRRARSGLSDPNR
PIGSFIFLGPTGVGKTETARALASFLFDDDQAIVRIDMSEYQEKHTVARLIGAPPGYVGY
EEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGRTVDFKNSVIIM
TSNLGSQWIQQYGATDYAKMQGEVMETLREAFKPEFLNRVDEIVIYHALPLERIKEIVSI
QLQSLTRRLEEKSIGLEVTEQAREFLAREGYDPAYGARPLKRALQRKIQDPLALMLLEGK
FGPGDTVQVDVAGDGNSLAIGRK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgattagacaggaaaagatgaccgttaaaacgcaggaagctatagcgacggctcacgaa
aatgccctcgccatgtccgcccccgctatcgaagcggaacacctgctgctcgcacttatc
gaccaggatgggggcttcgtccccgacctcatcaagaagatcggcgctcccctgccgcgc
ctgcgcgacagcgtagaagatgtgctcaagcgcctgcccaaggtgaccggcggcgcgcag
gtcgggctctcggcggctttgaaccgcatcctggaccaggcccagaaagaagcggacacc
atgcacgactcgttcgtttcgacggagcacctgctgctggcgctggtggcatccaaggat
acgcccagcggccggctcttgagccagaacggcgtgacccgtgacggcatcctcgccgcg
ctgaaggaattgcgtggcggcgaggccgtcaacgaacaggacccggaacagaaataccag
gcgctggcgaaatactgccgcgacctgaccgacctcgcccgtcaggggaaactcgacccg
gtcatcgggcgcgacgacgagatccgccgcgtgctccaggtactgtcgcgccgcaccaag
aacaacccggtactgatcggcgaaccgggcgtcggcaagaccgccatcgccgaggggctc
gcccagcgcatcgtctccggcgacgtccccgaaacgctcaaggacaaggtgatcatggcg
ctcgacatgggagcgctcatcgccggcgccaagtaccgcggcgaattcgaggagcggctc
aaggccgtcataaaggaagtggcgcgctcggaaggcaagatcatcctcttcatcgacgag
atgcacacgctggtgggcgcgggagcggctgagggcgccatggatgcctccaacatgctc
aagcccgcgctggcccgcggcgagttgcactgcatcggcgccaccaccctcaacgagtac
agaaagcacatcgagaaggacgcggcactggagcggcgcttccagcaggtctacgccggc
gagccgagcgtggaggagaccatctccatcctgcgcggcctcaaggaaaagtacgaaaac
taccacaagatccagatcaaggattccgccatcatcgccgcggcgaccctgtccgaccgc
tacatcaccgaccgcttcctcccggacaaggcgatcgaccttatcgacgaggcagcctcg
cggctcaggatcgagctggactccaagccgaccgagatcgacgaaatcgaccgccgggtt
atccagctccagatagagcgggaggccatgctgcgcgagcacgacccgaaggcactggaa
aggctcaagaagctggaagaggaactggcaacgctgaaggcccagtcggacgagctgaac
agccactggaaacgggaaacgaacatcctggccgagttgggcgagctcaagcagcgcaag
gaggacaaagccgaggaggccaaacgcgccgagcgcgacggcctgctggcccgcaccgcc
gagatccgctacggcgaaatcccggccatcgagaaggagatcgaggacaagcgcctcacc
ctggaacagatccagaaggaagggaagatgctcccggaggaggtggacgccgagatggtg
gccgaggtggtcgccaagtggaccggcatcccggtgaaccggatgctggagaccgaaagc
gagaagctggtgcgcatggaagagcggctgaaaagccgggtggtgggccaggacgaggcg
ctcaccctggtggccaacgcggtgcgccgcgccaggagcggcctgtccgacccgaaccgc
cccatcggctccttcatcttcctgggccccaccggggtcggcaaaaccgaaacggcccgg
gccctggcgtcgttcctgttcgacgacgaccaggccatcgtgcgcatcgacatgagcgag
taccaggaaaagcacacggtggcccgcctgatcggggctccccctgggtacgtcgggtac
gaggagggaggccagctcaccgaggcggtacggcgccgcccctactgcatcgtgctcttc
gacgagatcgaaaaggcgcatcccgaggtgttcaacgtcttcctgcagatcctcgatgac
ggcaggctgaccgacgggcagggacggacggtggacttcaagaactcggtgatcatcatg
accagcaacctgggatcgcagtggatccagcagtacggcgccaccgactacgccaagatg
cagggcgaggtcatggagaccctcagggaggccttcaagccggaattcctgaaccgcgtc
gacgagatcgtcatctaccacgcgctccccctggaacggatcaaggagatcgtctcgata
cagctgcagtccctgaccaggcggctggaagagaagagcatcgggctggaggtcaccgag
caggcacgcgagttcctggcgcgggaaggctacgaccccgcctatggcgcgcggcctttg
aagcgcgccctgcagcgcaagatccaggacccgctggcgctcatgctgctggaaggaaag
ttcggccccggagacacggtccaggtggacgtggcaggggacgggaactccctcgccatc
ggccgcaagtag
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