Geomonas paludis: M1B72_19265
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Entry
M1B72_19265 CDS
T08160
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gpl
Geomonas paludis
Pathway
gpl00470
D-Amino acid metabolism
gpl00550
Peptidoglycan biosynthesis
gpl01100
Metabolic pathways
gpl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M1B72_19265
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M1B72_19265
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
M1B72_19265
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
M1B72_19265
Enzymes [BR:
gpl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
M1B72_19265
Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
Precursor biosynthesis
Amino acid ligase
M1B72_19265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
GARS_A
TTL
Motif
Other DBs
NCBI-ProteinID:
UPU35555
LinkDB
All DBs
Position
complement(4501864..4502781)
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AA seq
305 aa
AA seq
DB search
MTIQDLKTKKIAVLMGGLSAEREVSLNSGKAVLASLQRQGYNAVGIDVGRDLAQRLAEEK
VDLAFIALHGRFGEDGSVQGLLELMAIPYTGSGVLASALAIDKIAAKVMFAAAGLKLAPY
QVLRRGEELKLENPLPVVVKPSKEGSSVGVSIVKEPGQMAKALEDAFRYDSEILIEAFIS
GKEVQVGILDGRAMGAIEIVPKNEFYDYEAKYTDGGAEHILPARLPESVYQAVLKEGEKA
HAALGCDCYSRVDFLVNEAGECYLLEVNTLPGMTDLSLLPEIARGSDIDFDQLVVRIISA
ASLKI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacaggacctgaaaaccaagaagatcgccgtgctgatgggggggctttccgcc
gagcgcgaggtgtccctgaacagcggcaaggccgtgctcgcttcgctgcagcgccagggg
tataacgccgtcggcatcgacgtcggccgcgacctggctcagcgcctggccgaagagaag
gtggatctggccttcatcgccctgcacggccgcttcggcgaagacggttcggtacagggt
ctgctggagctgatggcaataccctacaccggttccggcgtgctcgcgtcggcccttgcc
atcgacaagatcgccgccaaagtcatgtttgccgccgccggcttgaagcttgccccctac
caggtgctgcgccgcggcgaggaactgaagcttgagaatcccctgccggtggtggtgaag
ccctccaaggaaggctcctcggtcggcgtcagcatcgtgaaagagcccggccagatggcg
aaggcgctcgaggatgccttccgctacgactccgagatcctgatcgaggcattcatcagc
ggcaaggaggtccaggtcggcatactggacggacgcgccatgggcgccatcgagatcgtt
ccgaaaaatgagttctacgactacgaggcgaagtacaccgacggcggcgccgagcacatc
ctcccggcccgcctgccggagagcgtgtaccaggcggtcctgaaggaaggcgagaaggcc
cacgccgccctgggctgcgactgctacagccgtgtcgacttcctggtcaacgaggccggc
gagtgctacctcctcgaggtgaacaccctgccgggaatgaccgacctgagcctgctgccg
gaaatcgcccgcggctccgatatcgattttgaccagttggtggtgcgcattatctctgcc
gcatcgctgaaaatctga
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